Skip to content

Issues: steineggerlab/foldseek

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

162 Open 158 Closed
162 Open 158 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Clustering ProstT5 DB?
#361 opened Oct 1, 2024 by HaimAshk
2
database downloading error, Network is unreachable.
#360 opened Sep 30, 2024 by Liao-PRIC
Multimercluster error in tutorial
#357 opened Sep 24, 2024 by sirius777coder
@sooyoung-cha @rachelse
2
Coverage Mode Option Not Affecting TM Scores in HTML Output
#355 opened Sep 22, 2024 by khatrics16
How to get 3di sequence MSA?
#352 opened Sep 19, 2024 by code4luck
1
In my created database, proteins are complexes, and they have DNA/RNA within their structure. Will these DNA/RNA influence the structure-based search/cluster?
#351 opened Sep 19, 2024 by Huilin-Li
foldcomp question
#350 opened Sep 18, 2024 by SIITW
Can protein complexes (multi-chain) structures be clustered? [not bug]
#349 opened Sep 18, 2024 by minirose2021
2
easy-search problem - paniced
#348 opened Sep 16, 2024 by christophista
Retrieving 3Di sequence from 'foldseek easy-search'
#347 opened Sep 13, 2024 by parkjooyoung99
Clustering problem: the sequences length is less than 14 residues
#346 opened Sep 13, 2024 by jiaweiguan
why the download table is slightly different to the output of the webserver
#341 opened Aug 30, 2024 by Huilin-Li
An error occurred in convertalis when outputting alntmscore、fident and prob
#340 opened Aug 29, 2024 by TigerWindWood
Discrepancy in Search Results for W_H Domain Across Different Database Sizes
#338 opened Aug 28, 2024 by yonatan212
Clustering of multi-chain proteins
#337 opened Aug 28, 2024 by jiaweiguan
3
Mismatch 3Di Sequence Inferenced from FoldSeek Command and that from mini3di repo
#336 opened Aug 27, 2024 by KatarinaYuan
2
Missing Alignment Visualizations in html Output
#335 opened Aug 27, 2024 by Jonasgrove
1
Download PDB from HTML file
#334 opened Aug 27, 2024 by gc-js
How to interpret lddtfull?
#333 opened Aug 27, 2024 by mwittep
2
How to get bot structure alignments and its TMScore and RMSD after easy-search
#331 opened Aug 22, 2024 by amani-acog
Error: Convert Alignments died
#329 opened Aug 15, 2024 by pisle0
7
foldseek-mpi Error: Structure alignment step died
#328 opened Aug 14, 2024 by vmkhot
1
Question: retreive information about already created database?
#326 opened Aug 13, 2024 by gieses
cmake with CUDA fails
#324 opened Aug 8, 2024 by mohmhm1
2
Why the evalues of TMalign with FoldSeek are all so large?
#323 opened Aug 6, 2024 by TJiangBio
2
ProTip! Follow long discussions with comments:>50.