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Steinegger Lab

Steinegger Lab Github repositories

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  1. foldseek foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    C 780 99

  2. foldcomp foldcomp Public

    Compressing protein structures effectively with torsion angles

    C++ 152 14

  3. Metabuli Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    C++ 111 10

  4. ufcg ufcg Public

    UFCG: Universal Fungal Core Genes

    Java 31

  5. conterminator conterminator Public

    Detection of incorrectly labeled sequences across kingdoms

    C 77 7

  6. foldmason foldmason Public

    Multiple Protein Structure Alignment at Scale with FoldMason

    C 115 10

Repositories

Showing 10 of 25 repositories
  • steineggerlab/afdb-clusters-web’s past year of commit activity
    Jupyter Notebook 2 GPL-3.0 1 1 0 Updated Oct 4, 2024
  • Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    steineggerlab/Metabuli’s past year of commit activity
    C++ 111 GPL-3.0 10 10 0 Updated Oct 3, 2024
  • foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    steineggerlab/foldseek’s past year of commit activity
    C 780 GPL-3.0 99 162 2 Updated Sep 30, 2024
  • steineggerlab/Metabuli-App’s past year of commit activity
    HTML 19 GPL-3.0 2 0 0 Updated Sep 30, 2024
  • unicore Public

    Universal and efficient core gene phylogeny with Foldseek and ProstT5

    steineggerlab/unicore’s past year of commit activity
    Rust 13 GPL-3.0 1 0 0 Updated Sep 19, 2024
  • foldseek-regression Public

    Regression test for foldseek

    steineggerlab/foldseek-regression’s past year of commit activity
    Shell 3 2 0 1 Updated Sep 14, 2024
  • foldmason Public

    Multiple Protein Structure Alignment at Scale with FoldMason

    steineggerlab/foldmason’s past year of commit activity
    C 115 GPL-3.0 10 8 0 Updated Sep 13, 2024
  • steineggerlab/foldseek-multimer-analysis’s past year of commit activity
    Python 1 0 0 0 Updated Sep 10, 2024
  • steineggerlab/foldmason-analysis’s past year of commit activity
    Shell 1 0 0 0 Updated Aug 27, 2024
  • foldcomp Public

    Compressing protein structures effectively with torsion angles

    steineggerlab/foldcomp’s past year of commit activity
    C++ 152 GPL-3.0 14 22 (5 issues need help) 0 Updated Aug 9, 2024