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Update regression Regression test #50: Commit c9cfaf0 pushed by milot-mirdita
January 4, 2024 08:34 4m 17s master
master
January 4, 2024 08:34 4m 17s
Update regression Regression test #49: Commit 085f532 pushed by milot-mirdita
January 3, 2024 09:44 3m 9s master
master
January 3, 2024 09:44 3m 9s
Cleanup petasearch workflow Regression test #48: Commit 266a742 pushed by milot-mirdita
January 3, 2024 05:18 2m 54s master
master
January 3, 2024 05:18 2m 54s
Replace BlockAligner by MMseqs2 BlockAligner WIP version Regression test #47: Commit 0a51fa4 pushed by milot-mirdita
January 3, 2024 05:15 2m 57s master
master
January 3, 2024 05:15 2m 57s
Ungapped alignment vs consensus sequences instead of reps Regression test #46: Commit bc92748 pushed by milot-mirdita
September 3, 2023 08:07 6m 34s master
master
September 3, 2023 08:07 6m 34s
Scale profile scores Regression test #45: Commit e0166e2 pushed by Daniel-Liu-c0deb0t
July 13, 2023 21:10 4m 39s master
master
July 13, 2023 21:10 4m 39s
Merge commit '7b1982c4ef86341afaa2734814c1d5ffb383d18d' Regression test #44: Commit 461f386 pushed by Daniel-Liu-c0deb0t
July 11, 2023 19:47 4m 32s master
master
July 11, 2023 19:47 4m 32s
Fix profile length in BlockAligner Regression test #43: Commit ceded2b pushed by Daniel-Liu-c0deb0t
July 9, 2023 06:18 4m 30s master
master
July 9, 2023 06:18 4m 30s
Fix profile stride Regression test #42: Commit f613034 pushed by Daniel-Liu-c0deb0t
July 9, 2023 05:42 4m 20s master
master
July 9, 2023 05:42 4m 20s
Get rid of the query Sequence object and expose xdrop Regression test #41: Commit 32d32a6 pushed by milot-mirdita
July 6, 2023 15:36 4m 36s master
master
July 6, 2023 15:36 4m 36s
Profile search is now mostly working Regression test #40: Commit ef06379 pushed by milot-mirdita
July 6, 2023 10:45 4m 36s master
master
July 6, 2023 10:45 4m 36s
Do intitial buggy (re)implementation of profile searches Regression test #39: Commit 6f04d6f pushed by milot-mirdita
July 5, 2023 16:17 5m 33s master
master
July 5, 2023 16:17 5m 33s
Preallocate tables in comparekmertables Regression test #38: Commit a2b23ce pushed by milot-mirdita
June 28, 2023 08:47 6m 5s master
master
June 28, 2023 08:47 6m 5s
Eliminate k-mers that were never hit before sorting Regression test #37: Commit 09c0b25 pushed by milot-mirdita
June 28, 2023 08:24 5m 16s master
master
June 28, 2023 08:24 5m 16s
Speed-up deep copy with memcpy Regression test #36: Commit f2a3c1d pushed by milot-mirdita
June 28, 2023 07:39 6m 22s master
master
June 28, 2023 07:39 6m 22s
Copy query table only once and reset after use Regression test #35: Commit aab6657 pushed by milot-mirdita
June 28, 2023 07:08 4m 45s master
master
June 28, 2023 07:08 4m 45s
Arrange databases to process round-robin to try to always read from a… Regression test #34: Commit c814cd7 pushed by milot-mirdita
June 28, 2023 06:09 6m 2s master
master
June 28, 2023 06:09 6m 2s
Add support to compute backtraces if needed Regression test #33: Commit bd2bdc5 pushed by milot-mirdita
June 27, 2023 07:51 5m 33s master
master
June 27, 2023 07:51 5m 33s
Fix block-aligner rev block Regression test #32: Commit 7c65be3 pushed by milot-mirdita
June 27, 2023 07:27 6m 19s master
master
June 27, 2023 07:27 6m 19s
Keep track of number of alignments computed Regression test #31: Commit 401180f pushed by milot-mirdita
June 27, 2023 06:33 6m 18s master
master
June 27, 2023 06:33 6m 18s
Remove support for writing source files in convert2sradb Regression test #30: Commit a86437b pushed by milot-mirdita
June 26, 2023 14:56 31m 55s master
master
June 26, 2023 14:56 31m 55s