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Pull requests: nf-core/tools
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Template: add option to exclude the workflows directory from pipeline template
#3171
opened Sep 16, 2024 by
mirpedrol
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exclude CITATIONS.md file when excluding citations from pipeline template
#3169
opened Sep 16, 2024 by
mirpedrol
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Remove if/else block to include
igenomes.config
and add igenomes_ignored.config
#3168
opened Sep 16, 2024 by
mirpedrol
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Template: remove try-catch blocks from nextflow.config
#3167
opened Sep 13, 2024 by
mirpedrol
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Template: Update modules and and local subworkflow syntax
#3166
opened Sep 13, 2024 by
mirpedrol
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Update pre-commit hook editorconfig-checker/editorconfig-checker.python to v3
#3155
opened Sep 1, 2024 by
renovate
bot
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1 task
Update pre-commit hook pre-commit/mirrors-mypy to v1.11.2
#3151
opened Sep 1, 2024 by
renovate
bot
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1 task
Update pre-commit hook astral-sh/ruff-pre-commit to v0.6.6
#3150
opened Sep 1, 2024 by
renovate
bot
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1 task
Template: test pipeline with conda and singularity on PRs to master
#3149
opened Aug 30, 2024 by
mirpedrol
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Update dependency prompt_toolkit to <=3.0.47
#3121
opened Aug 16, 2024 by
renovate
bot
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1 task
Schema: rewrite to run local only and handle newer schema versions
WIP
Work in progress
#3117
opened Aug 14, 2024 by
mashehu
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fix the nested list bug that makes email not be delivered
#3081
opened Jul 25, 2024 by
HaidYi
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2 of 4 tasks
Add option
--fix
to update the meta.yml
file of subworkflows.
#3077
opened Jul 24, 2024 by
mirpedrol
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ci: Run checks on renovate branches to avoid creating and merging PRs
#3018
opened Jun 6, 2024 by
edmundmiller
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Updated in the last three days: updated:>2024-09-17.