v0.2.0

What's Changed

• Added docs dependencies and cruft update by @hrshdhgd in #29
• Adding --jsonpath option to index command. by @cmungall in #31
• Adding venomx dependency by @cmungall in #22
• Allow gpt-4o by @cmungall in #38
• BYOE bring your own embeddings by @justaddcoffee in #35
• Auto-KB: Adding more automation functions by @cmungall in #41
• duckdb_adapter implementation by @iQuxLE in #44
• uniprot loader by @cmungall in #43
• dragon-ai workflows by @cmungall in #47
• fixes #48 by @cmungall in #49
• Fix #50 by @caufieldjh in #51
• fixes #45, full downstream compatability duckdb and chromadb by @iQuxLE in #53
• Fix issue with parsing errors in Mapping agent by @caufieldjh in #54
• Duckdbadapter implementation by @iQuxLE in #55
• Getting correct vector dimensions for search by @cmungall in #56
• Fixes for retrieving GitHub issues by @caufieldjh in #61
• Add config to each pydantic BaseModel; fix #59 by @caufieldjh in #60
• DuckDBAdapter: Batch OpenAI calls by @iQuxLE in #62
• test suite fixes by @cmungall in #63
• improved --path handling in CLI #64 fix ef and dim selection #65 by @iQuxLE in #66
• linting and consolidate poetry by @iQuxLE in #72
• Prevent dimension errors in search via duckdb by @iQuxLE in #75
• improve batching and minimise API requests when embedding docs in duckdb_adapter by @iQuxLE in #70
• Openai api key decorator - fix whole test suite by @iQuxLE in #76
• Optimize linting setup - utilize solely Ruff by @iQuxLE in #78
• Add support for pushing embeddings/metadata to huggingface by @justaddcoffee in #79
• Workaround for segfaults with duckdb 1.1.0 by @caufieldjh in #83
• Improve handling of Markdown parsing errors by @caufieldjh in #82
• new PullRequest class in src/curate_gpt/wrappers/general/github_wrapper.py by @turbomam in #86
• Fixing tests with provided OPENAI_API_KEY by @iQuxLE in #85
• Updates for v0.2.0 by @caufieldjh in #88

New Contributors

• @iQuxLE made their first contribution in #44
• @caufieldjh made their first contribution in #51
• @turbomam made their first contribution in #86

Full Changelog: v0.1.4...v0.2.0