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This repository contains a program to query positions from an alignment file (bam file) and report back coverage statistics. Things like the number of reads found, number of As,Cs,Ts,Gs, "proper pairs", and perfect mapping quality reads.
AO33/BamPositionalCoverageStats
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This repository contains a program to query positions from an alignment file (bam file) and report back coverage statistics. Things like the number of reads found, number of As,Cs,Ts,Gs, "proper pairs", and perfect mapping quality reads.
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