bag-pr-ci #20
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| # CI flow | |
| name: bag-pr-ci | |
| on: | |
| push: | |
| schedule: | |
| - cron: '0 9 * * *' # 9AM UTC = 2AM PST | |
| env: | |
| CONDA_ENV_NAME: bag_py3d7_c | |
| jobs: | |
| build_pybag: | |
| runs-on: ubuntu-20.04 | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| continue-on-error: true | |
| strategy: | |
| matrix: | |
| python-version: ["3.7"] | |
| steps: | |
| - name: Checkout submodule | |
| uses: actions/checkout@v3 | |
| with: | |
| submodules: recursive | |
| # Phase 1: Conda setup | |
| - name: Setup conda | |
| uses: conda-incubator/[email protected] | |
| with: | |
| activate-environment: ${{ env.CONDA_ENV_NAME }} | |
| python-version: ${{ matrix.python-version }} | |
| auto-activate-base: false | |
| - name: Save Conda Env | |
| # Workaround, this isn't working otherwise. | |
| run: | | |
| echo "CONDA=$CONDA" | |
| echo "CONDA=$CONDA" >> "$GITHUB_ENV" | |
| - name: Cache Conda env | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ env.CONDA }}/envs/${{ env.CONDA_ENV_NAME }} | |
| key: | |
| conda-${{ runner.os }}--${{ runner.arch }}--${{ | |
| steps.get-date.outputs.today }}-${{ | |
| hashFiles('environment.yml') }}-${{ | |
| env.CACHE_NUMBER }} | |
| env: | |
| # Increase this value to reset cache if etc/example-environment.yml has not changed | |
| CACHE_NUMBER: 0 | |
| id: cache-conda | |
| - name: Install packages | |
| if: steps.cache-conda.outputs.cache-hit != 'true' | |
| run: | | |
| sudo apt update | |
| sudo apt -y install \ | |
| autoconf \ | |
| curl \ | |
| gcc-8 \ | |
| g++-8 \ | |
| git \ | |
| libtool \ | |
| libltdl-dev \ | |
| pkg-config \ | |
| make \ | |
| - name: Update conda environment | |
| if: steps.cache-conda.outputs.cache-hit != 'true' | |
| run: | | |
| echo "env.conda=${{ env.CONDA }}" | |
| conda env update -n ${{ env.CONDA_ENV_NAME }} -f environment.yml | |
| - name: Install additional dependencies | |
| if: steps.cache-conda.outputs.cache-hit != 'true' | |
| run: | | |
| cd pybag/setup | |
| mkdir install | |
| cp setup_script.sh install/ | |
| cp render_template.py install/ | |
| cp project-config.template install/ | |
| cd install | |
| ./setup_script.sh | |
| # Phase 2: Build pybag | |
| - name: Get pybag commit string | |
| run: | | |
| cd pybag | |
| export PYBAG_COMMIT="$(git rev-parse HEAD)" | |
| echo $PYBAG_COMMIT | |
| echo "PYBAG_COMMIT=$PYBAG_COMMIT" >> "$GITHUB_ENV" | |
| - name: Cache pybag | |
| id: cache-pybag | |
| uses: actions/cache@v4 | |
| with: | |
| path: pybag/_build | |
| key: | |
| pybag-${{ runner.os }}--${{ runner.arch }}--${{ | |
| hashFiles('environment.yml') }}-${{ | |
| env.PYBAG_COMMIT }} | |
| env: | |
| # Increase this value to reset cache if etc/example-environment.yml has not changed | |
| CACHE_NUMBER: 0 | |
| - name: Build pybag | |
| if: (steps.cache-pybag.outputs.cache-hit != 'true') || (steps.cache-conda.outputs.cache-hit != 'true') | |
| id: cpp-build | |
| run: | | |
| cd pybag | |
| export PYBAG_PYTHON=python | |
| echo "PYBAG_PYTHON=$PYBAG_PYTHON" | |
| ./run_test.sh | |
| tests: | |
| needs: build_pybag | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| runs-on: ubuntu-latest | |
| continue-on-error: true | |
| outputs: | |
| pytestOutput: ${{ steps.unit-tests.outputs.test }} | |
| mypyOutput: ${{ steps.type-checks.outputs.test }} | |
| strategy: | |
| matrix: | |
| python-version: ["3.7"] | |
| steps: | |
| - name: Checkout submodule | |
| uses: actions/checkout@v3 | |
| with: | |
| submodules: recursive | |
| # Phase 1: Conda cache load | |
| - name: Setup conda | |
| uses: conda-incubator/[email protected] | |
| with: | |
| activate-environment: ${{ env.CONDA_ENV_NAME }} | |
| python-version: ${{ matrix.python-version }} | |
| auto-activate-base: false | |
| - name: Save Conda Env | |
| # Workaround, this isn't working otherwise. | |
| run: | | |
| echo "CONDA=$CONDA" | |
| echo "CONDA=$CONDA" >> "$GITHUB_ENV" | |
| - name: Cache Conda env | |
| uses: actions/cache@v4 | |
| with: | |
| path: ${{ env.CONDA }}/envs/${{ env.CONDA_ENV_NAME }} | |
| key: | |
| conda-${{ runner.os }}--${{ runner.arch }}--${{ | |
| steps.get-date.outputs.today }}-${{ | |
| hashFiles('environment.yml') }}-${{ | |
| env.CACHE_NUMBER }} | |
| env: | |
| # Increase this value to reset cache if etc/example-environment.yml has not changed | |
| CACHE_NUMBER: 0 | |
| id: cache-conda | |
| # Phase 2: Pybag cache load | |
| - name: Get pybag commit string | |
| run: | | |
| cd pybag | |
| export PYBAG_COMMIT="$(git rev-parse HEAD)" | |
| echo $PYBAG_COMMIT | |
| echo "PYBAG_COMMIT=$PYBAG_COMMIT" >> "$GITHUB_ENV" | |
| - name: Cache pybag | |
| id: cache-pybag | |
| uses: actions/cache@v4 | |
| with: | |
| path: pybag/_build | |
| key: | |
| pybag-${{ runner.os }}--${{ runner.arch }}--${{ | |
| hashFiles('environment.yml') }}-${{ | |
| env.PYBAG_COMMIT }} | |
| env: | |
| # Increase this value to reset cache if etc/example-environment.yml has not changed | |
| CACHE_NUMBER: 0 | |
| # Phase 3: Run tests | |
| - name: Set python path | |
| run: | | |
| export PYTHONPATH="$(pwd)/tests:$(pwd)/pybag/_build/lib:$(pwd)/src" | |
| echo $PYTHONPATH | |
| echo "PYTHONPATH=$PYTHONPATH" >> "$GITHUB_ENV" | |
| - name: Run simple test | |
| id: simple-test | |
| run: | | |
| python tests/run_core.py | |
| - name: Run unit tests | |
| id: unit-tests | |
| run: | | |
| pytest tests/ -v |