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Show all descriptions and alignments with maximum score #37

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krdav opened this issue Aug 14, 2023 · 0 comments
Open

Show all descriptions and alignments with maximum score #37

krdav opened this issue Aug 14, 2023 · 0 comments

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@krdav
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krdav commented Aug 14, 2023

SWIPE is great but I am running into to issues when aligning sequences that have many hits with the same alignment score. I want all these to appear in the output. I could just increase --num_alignments and --num_descriptions but this is not a good solution as the output file balloons.

It would be great if an option existed that would only print out all the highest scoring descriptions and/or alignments.

Thanks,
Kristian

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