This repository contains Shiny web app templates for visualizaling bioinformatic data analysis results. So far, there are two types of Shiny apps, which are described below:
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RNAseq viewer This type of app displays 3 interactive plots from an RNAseq analysis. These plots are, MA plot, Volcano plot and a count plot, which is dynamically plotted by user click input. There is also an html table displaying the results of the analysis which can be queried, and interacts with the display plots above. An advanced version of this app displays additional tabs of GO terms and KEGG pathways to be selected, and which genes relating to those GO terms and KEGG pathways appears in corresponding volcano plots.
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Proteomic viewer This type of app displays 2 interactive plots from a proteomic mass spectrometry analysis. These plots are, Volcano plot and an expression plot, which is dynamically plotted by user click input. There is also an html table displaying the results of the analysis which can be queried, and interacts with the display plots above.