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Add the full taxonomic classification to JobID_classifications.tsv #36

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Serka-M opened this issue Aug 9, 2023 · 0 comments
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enhancement New feature or request

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@Serka-M
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Serka-M commented Aug 9, 2023

Hello, thank you for developing Metabuli, it has worked great with my test datasets!

One minor suggestion is to add or have an option to add the full taxonomy in JobID_classifications.tsv or a similar report.

For example, if a read or contig gets classified down to species level, such as Escherichia coli using GTDB pre-built database, it would be great to have the full d__Bacteria; p__Pseudomonadota; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli output automatically included in the report.

This feature would make metabulis output way more user-friendly and interpretable, especially for people who don't want to spend time sifting through taxID numbers.

Cheers!

@jaebeom-kim jaebeom-kim added the enhancement New feature or request label Aug 10, 2023
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