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Hello, thank you for developing Metabuli, it has worked great with my test datasets!
One minor suggestion is to add or have an option to add the full taxonomy in JobID_classifications.tsv or a similar report.
For example, if a read or contig gets classified down to species level, such as Escherichia coli using GTDB pre-built database, it would be great to have the full d__Bacteria; p__Pseudomonadota; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli output automatically included in the report.
This feature would make metabulis output way more user-friendly and interpretable, especially for people who don't want to spend time sifting through taxID numbers.
Cheers!
The text was updated successfully, but these errors were encountered:
Hello, thank you for developing Metabuli, it has worked great with my test datasets!
One minor suggestion is to add or have an option to add the full taxonomy in
JobID_classifications.tsv
or a similar report.For example, if a read or contig gets classified down to species level, such as
Escherichia coli
using GTDB pre-built database, it would be great to have the fulld__Bacteria; p__Pseudomonadota; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
output automatically included in the report.This feature would make metabulis output way more user-friendly and interpretable, especially for people who don't want to spend time sifting through taxID numbers.
Cheers!
The text was updated successfully, but these errors were encountered: