Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Issue with finding NII.GZ files #2

Open
jcohenadad opened this issue Jul 23, 2024 · 0 comments
Open

Issue with finding NII.GZ files #2

jcohenadad opened this issue Jul 23, 2024 · 0 comments

Comments

@jcohenadad
Copy link
Member

jcohenadad commented Jul 23, 2024 •
edited
Loading

The file that was given to me by @Mathilde-16 is called:

sub-MS0009_ses-20130224_cor_t1_3D_MPRAGE.nii.gz

However, this line of code looks for *_T1w.nii.gz file:
https://github.com/Mathilde-16/STOP_MS_data/blob/3857c957d9bdfeef6596b439bfa489f719cab94c/scripts/process_data.sh#L52

So that's not gonna work...

Related to #3
Mathilde-16 pushed a commit that referenced this issue Jul 23, 2024
Related to issues #2 #3
ac8bfed
@Mathilde-16 Mathilde-16 mentioned this issue Jul 23, 2024
Closed
Mathilde-16 pushed a commit that referenced this issue Jul 24, 2024
Modified name files following BIDS #2
18c0a94
Mathilde-16 added a commit that referenced this issue Jul 26, 2024
@Mathilde-16
Merge pull request #5 from sct-pipeline/mb/KI
af7d83c 
Modified name files following BIDS #2
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@jcohenadad