v1.6.3

Patch version bump for automated releases

version 1.6

NOTE: the big increment in version number (1.3 to 1.6) was accidental, and due to some confusion in versioning of python and MATLAB scripts.

Cleanup

• Manually update rdatkit version (python) to 1.6 to match overall release version.

Features

• run checks on REACTIVITY_ERROR in check_rdat, and error out if fail. (MATLAB code)
• allow reverse_transcriptase as a valid tag in RDATs (MATLAB code)
• actually save REACTIVITY_ERROR in save_constructs when new errors parameter is supplied (python RDATkit library)

Bug fixes

• hotfix (MATLAB) to allow read in of Lucks lab rdat CMVBN3_1M7_0001.rdat

version 1.3

• Bug fixes to get working on latest MATLAB
• Make sure MATLAB RDATkit works without having HiTRACE also installed
• Updates to MATLAB scripts to ensure backwards compatibility with "classic" EteRNA RDATs from 2011-2012.

version 1.2

Updates to Python and MATLAB scripts that allow write_rdat() and visualization scripts for M2seq analysis.

version 1.1

Updates to Python and MATLAB scripts that allow write_rdat() and visualization scripts for M2seq analysis.

Support RDAT Version 0.4

Support DATA tag with DATA_ANNOTATIONS for combining REACTIVITY, REACTIVITY_ERROR, TRACE, READS altogether. Also cleaned up old code, retrofit to PEP standard.