COPILOT (Cell preprOcessing PIpeline kaLlistO busTools)

Single cell RNA-seq preprocessing tool for gene-by-cell matrices of UMI counts. The utility and summary file offered by this tool is directly comparable to CellRanger 3.1, the tool developed by 10X Genomics. It is recommended to use the raw spliced and unspliced counts matrices produced by scKB pipeline as the input of COPILOT.