Skip to content

Commit

Permalink
Add github actions builds
Browse files Browse the repository at this point in the history
  • Loading branch information
r-ash committed Mar 6, 2024
1 parent 1e7370b commit 4646973
Show file tree
Hide file tree
Showing 4 changed files with 170 additions and 0 deletions.
1 change: 1 addition & 0 deletions .github/.gitignore
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
*.html
59 changes: 59 additions & 0 deletions .github/workflows/R-CMD-check.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,59 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: R-CMD-check

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}

# Shorter timeout to prevent mac builders hanging for 6 hours!
timeout-minutes: 30

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v3

- uses: r-lib/actions/setup-pandoc@v2

- name: Install libssh
if: runner.os == 'Linux'
run: |
sudo apt-get update
sudo apt-get install -y libssh-dev
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
extra-repositories: https://mrc-ide.r-universe.dev

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check

- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
53 changes: 53 additions & 0 deletions .github/workflows/pkgdown.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,53 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
release:
types: [published]
workflow_dispatch:

name: pkgdown

jobs:
pkgdown:
runs-on: ubuntu-latest
# Only restrict concurrency for non-PR jobs
concurrency:
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v3

- uses: r-lib/actions/setup-pandoc@v2

- name: Install libssh
if: runner.os == 'Linux'
run: |
sudo apt-get update
sudo apt-get install -y libssh-dev
- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true
extra-repositories: https://mrc-ide.r-universe.dev/bin/linux/jammy/4.3

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::pkgdown, local::.
needs: website

- name: Build site
run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
shell: Rscript {0}

- name: Deploy to GitHub pages 🚀
if: github.event_name != 'pull_request'
uses: JamesIves/[email protected]
with:
clean: false
branch: gh-pages
folder: docs
57 changes: 57 additions & 0 deletions .github/workflows/test-coverage.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,57 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: test-coverage

jobs:
test-coverage:
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v3

- name: Install libssh
if: runner.os == 'Linux'
run: |
sudo apt-get update
sudo apt-get install -y libssh-dev
- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true
extra-repositories: https://mrc-ide.r-universe.dev

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::covr
needs: coverage

- name: Test coverage
run: |
covr::codecov(
quiet = FALSE,
clean = FALSE,
install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package")
)
shell: Rscript {0}

- name: Show testthat output
if: always()
run: |
## --------------------------------------------------------------------
find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload test results
if: failure()
uses: actions/upload-artifact@v3
with:
name: coverage-test-failures
path: ${{ runner.temp }}/package

0 comments on commit 4646973

Please sign in to comment.