Code for Alfonso-Gonzalez et al.).
Structure:
- circRNA detection & saturation analysis:
CIRI2 - circRNA quantification:
snakemake.CIRIquant - circRNA binding, RIP-seq:
RIP-seq.eisa.junction_counts - intron binding, iCLIP:
iCLIP.Intron_analysis - Signal tracks for circRNA back-splice junctions:
STAR_Chimeric