Merge pull request #44 from mobehbooei/main

steps.md completed

gwf_data_extract/modify_xml.py

@@ -289,14 +289,14 @@ def assign_prj(in_file: str, out_file: str, doi2prj_file: str):
     with open (out_file, "wb") as files :
         tree.write(files, encoding='UTF-8', xml_declaration=True, method='xml')
 
-# get_new_doi_data('DOI_extra.csv')
+get_new_doi_data('DOI_extra.csv')
 # get_new_doi_data('non_doi_titles.csv')
 # find_doi_diffs('gwf_data_extract/doi_from_USask.csv')
 
-# add_doi_to_xml('non_doi_titles.csv', 'data/xml/', 'data/yaml/')
+add_doi_to_xml('non_doi_titles.csv', 'data/xml/', 'data/yaml/')
 # add_doi_to_xml('extra_publication_cleaned.csv', 'data/xml/', 'data/yaml/')
 # add_doi_to_xml('DOI_extra.csv', 'data/xml/', 'data/yaml/')
 
 # handle_HTML_entities("data/xml/G21.xml")
 # add_abstract_to_missing("data/xml/G17.xml", "data/xml/G17.xml")
-assign_prj("data/xml/G16.xml", "data/xml/G16.xml", "gwf_data_extract/doi2projects.xlsx")
+# assign_prj("data/xml/G16.xml", "data/xml/G16.xml", "gwf_data_extract/doi2projects.xlsx")

gwf_data_extract/steps.md

@@ -1,10 +1,21 @@
 # add new DOIs to the website
-1- put all your new DOIs in a new csv file
-2- from file modify_xml.py run get_new_doi_data() to get the data for these new DOIs
-3- from file modify_xml.py run add_doi_to_xml() to add these new papers to xml files
+1- put all your new DOIs in a new csv file  
+2- from file modify_xml.py run get_new_doi_data() to get the data for these new DOIs  
+3- from file modify_xml.py run add_doi_to_xml() to add these new papers to xml files  
 4- we should extract the name_variants.yaml file again by go through get_author_institute.ipynb file
 
 # update the projects
-1- update the file doi2projects.xlsx for modifining the project or add a new row for new record
-2- use create_projects.ipynb to regenerate the projects' numbers (running this code will update the third column of the same file)
+1- update the file doi2projects.xlsx for modifining the project or add a new row for new record  
+2- use create_projects.ipynb to regenerate the projects' numbers (running this code will update the third column of the same file)  
 3- after generating the doi2project.xlsx file use assign_prj function from modify_xml.py file to modify the xml files
+
+# build the website
+Just run this line of code in the root folder of the project
+
+```
+sudo ANTHOLOGY_PREFIX="https://gwf-uwaterloo.github.io/gwf-publications" make
+```
+
+# Update Docs folder
+1- delete all the files and folders inside the docs repo  
+2- copy all the files and folders inside build/website/gwf-publications repo and paste it to the docs repo