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Enable dumping only part of the buffer for burst writer. #1870

Merged
merged 27 commits into from
Aug 27, 2024
Merged

Enable dumping only part of the buffer for burst writer. #1870

merged 27 commits into from
Aug 27, 2024

Commits on Aug 15, 2024

  1. add burst writer dump options to dump only subset of stored frames

    @DomFijan
    DomFijan committed Aug 15, 2024
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  2. lint

    @DomFijan
    DomFijan committed Aug 15, 2024
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  3. fix typo

    @DomFijan
    DomFijan committed Aug 15, 2024
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  4. fix constructor

    @DomFijan
    DomFijan committed Aug 15, 2024
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  5. fix if

    @DomFijan
    DomFijan committed Aug 15, 2024
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  6. fix whitespace

    @DomFijan
    DomFijan committed Aug 15, 2024
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  7. add tests

    @DomFijan
    DomFijan committed Aug 15, 2024
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Commits on Aug 17, 2024

  1. change buffer type

    @DomFijan
    DomFijan committed Aug 17, 2024
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  2. improve error messages

    @DomFijan
    DomFijan committed Aug 17, 2024
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  3. cast to long int

    @DomFijan
    DomFijan committed Aug 17, 2024
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  4. cast to long int

    @DomFijan
    DomFijan committed Aug 17, 2024
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  5. use long int instead of unsigned

    @DomFijan
    DomFijan committed Aug 17, 2024
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  6. use -1 for end for whole deque

    @DomFijan
    DomFijan committed Aug 17, 2024
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  7. fix partial dumping indexing

    @DomFijan
    DomFijan committed Aug 17, 2024
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  8. lint

    @DomFijan
    DomFijan committed Aug 17, 2024
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  9. change error condition

    @DomFijan
    DomFijan committed Aug 17, 2024
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Commits on Aug 18, 2024

  1. Add missing parentheses

    @janbridley
    janbridley committed Aug 18, 2024
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Commits on Aug 19, 2024

  1. fix test

    @DomFijan
    DomFijan committed Aug 19, 2024
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Commits on Aug 21, 2024

  1. swap empty buffer with clear entire buffer. 

    When the whole buffer is not cleared, only part of the buffer up until the last frame that was written is cleared instead
    @DomFijan
    DomFijan committed Aug 21, 2024
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  2. fix logic for partial deletion

    @DomFijan
    DomFijan committed Aug 21, 2024
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  3. lint

    @DomFijan
    DomFijan committed Aug 21, 2024
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  4. add more tests

    @DomFijan
    DomFijan committed Aug 21, 2024
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Commits on Aug 22, 2024

  1. Update hoomd/write/gsd_burst.py 

    Co-authored-by: Jen Bradley <[email protected]>
    @DomFijan @janbridley
    DomFijan and janbridley committed Aug 22, 2024
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  2. move buffer clearing argument to class constructor

    @DomFijan
    DomFijan committed Aug 22, 2024
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  3. add setter and getter for clear whole buffer after dump

    @DomFijan
    DomFijan committed Aug 22, 2024
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Commits on Aug 26, 2024

  1. Document clear_whole_buffer in args.

    @joaander
    joaander committed Aug 26, 2024
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Commits on Aug 27, 2024

  1. pre-commit

    @joaander
    joaander committed Aug 27, 2024
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