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feat: added template.fixmate() (#83) #182

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@TimD1 TimD1 commented Sep 3, 2024

  • added fixmate() method
  • added set_mate_info_on_supplementary() helper function
  • moved builder._set_mate_info() to helper function set_mate_info()
  • moved test_template_iterator.py to test_template.py (contained more than just iterator)
  • added template_test_fixmate() tests

- added fixmate() method
- added set_mate_info_on_supplementary() helper function
- moved builder._set_mate_info() to helper function set_mate_info()
- moved test_template_iterator.py to test_template.py (contained more than just iterator)
- added template_test_fixmate() tests
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codecov bot commented Sep 3, 2024

Codecov Report

Attention: Patch coverage is 95.16129% with 3 lines in your changes missing coverage. Please review.

Project coverage is 89.64%. Comparing base (d574e5a) to head (dff494d).
Report is 7 commits behind head on main.

Files with missing lines Patch % Lines
fgpyo/sam/__init__.py 95.08% 1 Missing and 2 partials ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #182      +/-   ##
==========================================
+ Coverage   89.21%   89.64%   +0.42%     
==========================================
  Files          18       18              
  Lines        2068     2086      +18     
  Branches      457      460       +3     
==========================================
+ Hits         1845     1870      +25     
+ Misses        146      141       -5     
+ Partials       77       75       -2     

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@TimD1 TimD1 linked an issue Sep 3, 2024 that may be closed by this pull request
@TimD1 TimD1 changed the title feat: added template.fixmate() [issue #83] feat: added template.fixmate() (#83) Sep 3, 2024
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Add a method on Template to fixmate information
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