pycisTopic at date of publication

Merge pull request #58 from dburkhardt/master

Update pl.read_csv call (#57) + peak_calling bugfix (#61)

v1.0.1

• Full pycisTopic pipeline
• Bug fixes
• Documentation and tutorials

v1.0.0

First stable release

• QC metrics
• Creation of cistopic objects
• Run LDA (Mallet/CGS)
• Visualization (Dimensionality reduction, heatmap, IGV)
• Topic binarization and QC
• Imputed accessibility and DARs
• Gene activity and DAGs
• Label transfer
• Export to loom
• pyGREAT
• Signature enrichment