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Update 20240417 #191

Merged
merged 31 commits into from
Apr 25, 2024
Merged

Update 20240417 #191

merged 31 commits into from
Apr 25, 2024

Commits on Apr 17, 2024

  1. updated to 3.12.8-2024-01-31.1_2

    @erinyoung
    erinyoung committed Apr 17, 2024
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  2. updated to 39.06

    @erinyoung
    erinyoung committed Apr 17, 2024
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  3. updated to 16.10.3

    @erinyoung
    erinyoung committed Apr 17, 2024
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  4. update to 2.1.6_2024-03-07

    @erinyoung
    erinyoung committed Apr 17, 2024
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  5. update to 2.23.0-2024-04-01

    @erinyoung
    erinyoung committed Apr 17, 2024
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  6. updated to 1.3.1

    @erinyoung
    erinyoung committed Apr 17, 2024
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  7. updated to 2.0.2

    @erinyoung
    erinyoung committed Apr 17, 2024
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  8. specified core alignment

    @erinyoung
    erinyoung committed Apr 17, 2024
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  9. update to version 4.1.20240417

    @erinyoung
    erinyoung committed Apr 17, 2024
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  10. fixed phix ref

    @erinyoung
    erinyoung committed Apr 17, 2024
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Commits on Apr 23, 2024

  1. incremented version

    @erinyoung
    erinyoung committed Apr 23, 2024
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  2. changed quast files

    @erinyoung
    erinyoung committed Apr 23, 2024
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  3. matched now compressed

    @erinyoung
    erinyoung committed Apr 23, 2024
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  4. removed fastq count

    @erinyoung
    erinyoung committed Apr 23, 2024
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  5. renamed files

    @erinyoung
    erinyoung committed Apr 23, 2024
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  6. added reads to quast

    @erinyoung
    erinyoung committed Apr 23, 2024
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  7. trying countfastq

    @erinyoung
    erinyoung committed Apr 23, 2024
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Commits on Apr 24, 2024

  1. concat two quast results together

    @erinyoung
    erinyoung committed Apr 24, 2024
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  2. adjusting fasta message

    @erinyoung
    erinyoung committed Apr 24, 2024
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  3. re-added passed reads

    @erinyoung
    erinyoung committed Apr 24, 2024
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  4. removes spaces

    @erinyoung
    erinyoung committed Apr 24, 2024
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  5. added roary test

    @erinyoung
    erinyoung committed Apr 24, 2024
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  6. added test for roary

    @erinyoung
    erinyoung committed Apr 24, 2024
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  7. added roary back

    @erinyoung
    erinyoung committed Apr 24, 2024
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  8. added roary back

    @erinyoung
    erinyoung committed Apr 24, 2024
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  9. removed countFastq

    @erinyoung
    erinyoung committed Apr 24, 2024
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  10. added roary back in

    @erinyoung
    erinyoung committed Apr 24, 2024
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  11. removed comment

    @erinyoung
    erinyoung committed Apr 24, 2024
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  12. reverted to version 39.01

    @erinyoung
    erinyoung committed Apr 24, 2024
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  13. removed first

    @erinyoung
    erinyoung committed Apr 24, 2024
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  14. added ch_bams

    @erinyoung
    erinyoung committed Apr 24, 2024
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