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fix photos
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lhao03 authored Feb 26, 2024
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11 changes: 7 additions & 4 deletions src/dry-lab/software/index.md
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## Components

### Graphical User Interface
![image](https://github.com/UBC-iGEM/internal-wiki-2023-24/assets/55033656/eb19b67c-f1ce-4f16-87d2-1b7bf8b678a5)
![image](https://github.com/UBC-iGEM/internal-wiki-2023-24/assets/55033656/c603085f-0d10-4c40-9951-c46bd351ffd1)
![encoding_user_dark](https://github.com/UBC-iGEM/internal-wiki-2023-24/assets/55033656/4646bff2-fbe7-48d4-b55f-c272ec54545e)
![decoding_user_dark](https://github.com/UBC-iGEM/internal-wiki-2023-24/assets/55033656/6a31d75c-07f3-4a63-a605-5a68b58eb910)

- should be cross platform
- development can start early
- for iHP should have GUI ready early

### Encoding
![image](https://github.com/UBC-iGEM/internal-wiki-2023-24/assets/55033656/66c18be2-670d-47ad-bfa2-50bf76096cc2)
![encoding_dry_wet](https://github.com/UBC-iGEM/internal-wiki-2023-24/assets/55033656/18aa2971-3cb2-4135-b25f-f25b30ecb5a5)
- Redundancy
- Mapping of primers back to address space in software
- Primer generation
- Rotation based cipher
- Segmentation (blocks) of information

### Decoding
![image](https://github.com/UBC-iGEM/internal-wiki-2023-24/assets/55033656/c4919d15-d2d8-45d5-9900-33c74b2ef0bd)
![decoding_dry_wet](https://github.com/UBC-iGEM/internal-wiki-2023-24/assets/55033656/47924633-1ec9-4b7c-96b3-f9a703be84b2)
- Error correction
- Image processing
- Fuzzy string matching of primers with variable lengths of DNA sequences
- Reconstructing the file in software

## ChaosDNA
- fault simulation

### DNA as a Persistent Data Structure
- Generation of primers
- Reconstructing the file with updates in software

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