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@RasmussenLab

RasmussenLab

The Rasmussen group focuses on proteome and genome variation, coding variation and deep learning for integration of genomics, proteomics and clinical data.

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  1. vamb vamb Public

    Variational autoencoder for metagenomic binning

    Python 244 44

  2. MOVE MOVE Public

    MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations

    Jupyter Notebook 63 25

  3. phamb phamb Public

    Downstream processing of VAMB binning for Viral Elucidation

    Python 44 8

  4. pimms pimms Public

    Imputing proteomics data using deep learning models

    Python 16 2

  5. vCentenarian vCentenarian Public

    Repository with supporting code and information for virome analysis of Centenarian metagenomes

    Python 3 3

  6. IntroToML IntroToML Public

    Forked from Center-for-Health-Data-Science/IntroToML

    Machine Learning course at Copenhagen University, Faculty of Health and Medical Sciences, Center for Health Data Science

    Jupyter Notebook 3

Repositories

Showing 10 of 32 repositories
  • pimms Public

    Imputing proteomics data using deep learning models

    RasmussenLab/pimms’s past year of commit activity
    Python 16 GPL-3.0 2 1 0 Updated Sep 21, 2024
  • vamb Public

    Variational autoencoder for metagenomic binning

    RasmussenLab/vamb’s past year of commit activity
    Python 244 MIT 44 36 5 Updated Sep 19, 2024
  • MOVE Public

    MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations

    RasmussenLab/MOVE’s past year of commit activity
    Jupyter Notebook 63 MIT 25 10 2 Updated Sep 16, 2024
  • python_package Public template

    Example Python package

    RasmussenLab/python_package’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Sep 9, 2024
  • thesis_template_sund Public

    PhD thesis template using styling from the faculty of health and medical sciences (short SUND in Danish)

    RasmussenLab/thesis_template_sund’s past year of commit activity
    TeX 0 0 0 0 Updated Sep 9, 2024
  • hela_qc_mnt_data Public

    Functionality for processing and analysing HeLa data quality control (QC) and maintenance (MNT) samples processed by MaxQuant

    RasmussenLab/hela_qc_mnt_data’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Aug 19, 2024
  • thesis_template Public archive

    Template of thesis for overleaf at Copenhagen University

    RasmussenLab/thesis_template’s past year of commit activity
    TeX 0 1 0 0 Updated Jul 25, 2024
  • phamb Public

    Downstream processing of VAMB binning for Viral Elucidation

    RasmussenLab/phamb’s past year of commit activity
    Python 44 MIT 8 13 1 Updated Jul 3, 2024
  • git-tutorial Public Forked from betatim/vscode-binder

    VS Code on Binder

    RasmussenLab/git-tutorial’s past year of commit activity
    Python 0 BSD-3-Clause 63 1 1 Updated Jun 18, 2024
  • njab Public

    Not just another biomarkers: Functionality for biomarker discovery

    RasmussenLab/njab’s past year of commit activity
    Python 1 MIT 1 1 0 Updated Jun 7, 2024
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