ZhuMcGeeJCB2015

This repository contains R code for implementation of Abstraction Augmented Markov Models for metagenomc classification, as described in Zhu and McGee (in press), "Metagenomic Classification Using an Abstraction Augmented Markov Model", Journal of Computational Biology.

Code will be updated on a regular basis and posted here. Please contact the authors if you encounter any errors.

Please give credit where credit is due. The citation for the article will be available once the article is published.