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FCP-INDI / C-PAC Public

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Build and test C-PAC

Merge pull request #1916 from FCP-INDI/upgrade/python #241

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Merge pull request #1916 from FCP-INDI/upgrade/python

Merge pull request #1916 from FCP-INDI/upgrade/python #241

Summary
Jobs
- Check if preconfigs need updated
- Build C-PAC stage images for Ubuntu & FSL data (FSL.data)
  
  Build C-PAC stage images for Ubuntu & FSL data (Ubuntu.bionic-non-free)
  
  Build C-PAC stage images for Ubuntu & FSL data (Ubuntu.Python3.10-bionic-non-free)
  
  Build C-PAC stage images for Ubuntu & FSL data (Ubuntu.xenial-20200114)
  
  Build C-PAC Docker stage images for dependencies (AFNI.16.2.07.neurodocker-xenial)
  
  Build C-PAC Docker stage images for dependencies (AFNI.21.1.00-bionic)
  
  Build C-PAC Docker stage images for dependencies (AFNI.23.0.07-bionic)
  
  Build C-PAC Docker stage images for dependencies (ANTs.2.4.3.Python3.10-bionic)
  
  Build C-PAC Docker stage images for dependencies (c3d.1.0.0-xenial)
  
  Build C-PAC Docker stage images for dependencies (connectome-workbench.1.3.2-1.neurodebian-bionic)
  
  Build C-PAC Docker stage images for dependencies (connectome-workbench.1.3.2-2.neurodebian-xenial)
  
  Build C-PAC Docker stage images for dependencies (connectome-workbench.1.5.0.neurodebian-bionic)
  
  Build C-PAC Docker stage images for dependencies (FreeSurfer.7.3.2-Python3.10-bionic)
  
  Build C-PAC Docker stage images for dependencies (FSL.5.0.9-5.neurodebian-xenial)
  
  Build C-PAC Docker stage images for dependencies (FSL.5.0.10-bionic)
  
  Build C-PAC Docker stage images for dependencies (FSL.6.0.6.4-Python3.10-bionic)
  
  Build C-PAC Docker stage images for dependencies (ICA-AROMA.0.4.3-beta-bionic)
  
  Build C-PAC Docker stage images for dependencies (ICA-AROMA.0.4.4-beta-bionic)
  
  Build C-PAC Docker stage images for dependencies (ICA-AROMA.0.4.5-xenial)
  
  Build C-PAC Docker stage images for dependencies (msm.2.0-bionic)
  
  Build C-PAC base stage images (lite)
  
  Build C-PAC base stage images (ABCD-HCP)
  
  Build C-PAC base stage images (fMRIPrep-LTS)
  
  Build C-PAC standard base stage image
  
  Build Docker C-PAC images
  
  Build Docker C-PAC images
  
  Build Docker C-PAC images
  
  Build Docker C-PAC images
  
  Deploy 'lite' to Docker Hub
  
  Deploy 'ABCD-HCP' to Docker Hub
  
  Deploy 'fMRIPrep-LTS' to Docker Hub
  
  Human default participant smoke tests
  
  Human abcd-options participant smoke tests
  
  Human anat-only participant smoke tests
  
  Human benchmark-ANTS participant smoke tests
  
  Human benchmark-FNIRT participant smoke tests
  
  Human blank participant smoke tests
  
  Human ccs-options participant smoke tests
  
  Human fmriprep-options participant smoke tests
  
  Human fx-options participant smoke tests
  
  Human ndmg participant smoke tests
  
  Human preproc participant smoke tests
  
  Human rbc-options participant smoke tests
  
  Human regtest-1 participant smoke tests
  
  Human regtest-2 participant smoke tests
  
  Human regtest-3 participant smoke tests
  
  Human regtest-4 participant smoke tests
  
  Human default participant smoke tests
  
  Human abcd-options participant smoke tests
  
  Human fmriprep-options participant smoke tests
  
  Non-human primate monkey participant smoke tests
  
  Non-human primate nhp-macaque participant smoke tests
  
  Rodent participant smoke tests
  
  Run tests on CircleCI
  
  Deploy to Docker Hub
Run details
- Usage
- Workflow file

Usage Workflow file

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