sync inputs

Exec/science/xrb_layered/inputs_2d.nonsquare

@@ -62,7 +62,7 @@ amr.v                 = 1       # verbosity in Amr.cpp
 
 # REFINEMENT / REGRIDDING 
 amr.max_level       = 1       # maximum level number allowed
-amr.ref_ratio       = 4 2 2 2 # refinement ratio
+amr.ref_ratio       = 2 2 2 2 # refinement ratio
 amr.regrid_int      = 2 2 2 2 # how often to regrid
 amr.blocking_factor = 8       # block factor in grid generation
 amr.max_grid_size   = 256
@@ -74,7 +74,7 @@ amr.check_int       = 1000       # number of timesteps between checkpoints
 
 # PLOTFILES
 amr.plot_file       = xrb_plt    # root name of plotfile
-amr.plot_int        = 1000       # number of timesteps between plotfiles
+amr.plot_per        = 0.001
 amr.derive_plot_vars = ALL
 
 # PROBLEM PARAMETERS
@@ -84,11 +84,13 @@ problem.apply_perturbation = 1
 
 problem.model_shift = 750.0
 
-problem.H_min = 1.e-5
-problem.He_min = 1.e-5
+problem.H_min = -1
+problem.He_min = -1
 
 # MICROPHYSICS
 integrator.jacobian = 1
 
 integrator.atol_spec = 1.e-6
 integrator.rtol_spec = 1.e-6
+
+integrator.X_reject_buffer = 4.0

Exec/science/xrb_layered/inputs_3d.nonsquare

@@ -74,7 +74,7 @@ amr.check_int       = 1000       # number of timesteps between checkpoints
 
 # PLOTFILES
 amr.plot_file       = xrb_plt    # root name of plotfile
-amr.plot_per        = 0.001       # number of timesteps between plotfiles
+amr.plot_per        = 0.001      
 amr.derive_plot_vars = ALL
 
 amr.small_plot_file       = xrb_smallplt    # root name of plotfile
@@ -100,6 +100,4 @@ integrator.jacobian = 1
 integrator.atol_spec = 1.e-6
 integrator.rtol_spec = 1.e-6
 
-integrator.linalg_do_pivoting = 0
-
 integrator.X_reject_buffer = 4.0