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6 changes: 3 additions & 3 deletions pathways/WP1995/WP1995-bibliography.tsv
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ID Database Citation
19439460 Pubmed "Hord NG, Tang Y, Bryan NS. Food sources of nitrates and nitrites: the physiologic context for potential health benefits. Am J Clin Nutr. 2009 Jul;90(1):1–10. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/19439460"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/19439460"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/19439460"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
19915529 Pubmed "Lundberg JO, Gladwin MT, Ahluwalia A, Benjamin N, Bryan NS, Butler A, et al. Nitrate and nitrite in biology, nutrition and therapeutics. Nat Chem Biol. 2009 Dec;5(12):865–9. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/19915529"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/19915529"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/19915529"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
21284982 Pubmed "Larsen FJ, Schiffer TA, Borniquel S, Sahlin K, Ekblom B, Lundberg JO, et al. Dietary inorganic nitrate improves mitochondrial efficiency in humans. Cell Metab. 2011 Feb 2;13(2):149–59. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/21284982"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/21284982"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/21284982"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
19439460 Pubmed "Food sources of nitrates and nitrites: the physiologic context for potential health benefits. Hord NG, Tang Y, Bryan NS. Am J Clin Nutr. 2009 Jul;90(1):1–10. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/19439460"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/19439460"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/19439460"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
19915529 Pubmed "Nitrate and nitrite in biology, nutrition and therapeutics. Lundberg JO, Gladwin MT, Ahluwalia A, Benjamin N, Bryan NS, Butler A, et al. Nat Chem Biol. 2009 Dec;5(12):865–9. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/19915529"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/19915529"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/19915529"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
21284982 Pubmed "Dietary inorganic nitrate improves mitochondrial efficiency in humans. Larsen FJ, Schiffer TA, Borniquel S, Sahlin K, Ekblom B, Lundberg JO, et al. Cell Metab. 2011 Feb 2;13(2):149–59. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/21284982"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/21284982"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/21284982"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
30 changes: 15 additions & 15 deletions pathways/WP1995/WP1995-datanodes.tsv
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Label Type Identifier Comment Ensembl NCBI gene HGNC UniProt Wikidata ChEBI InChI
Nitric oxide Metabolite hmdb:HMDB0003378 chebi:16480;chebi:16480 inchikey:MWUXSHHQAYIFBG-UHFFFAOYSA-N
Nitrate Metabolite hmdb:HMDB0002878 chebi:17632;chebi:17632 inchikey:NHNBFGGVMKEFGY-UHFFFAOYSA-N
Citrulline Metabolite hmdb:HMDB0000904 chebi:16349;chebi:16349 inchikey:RHGKLRLOHDJJDR-BYPYZUCNSA-N
VItamin C Metabolite hmdb:HMDB0000044 chebi:29073;chebi:29073 inchikey:CIWBSHSKHKDKBQ-JLAZNSOCSA-N
Nitrite Metabolite hmdb:HMDB0002786 chebi:25567;chebi:25567 inchikey:IOVCWXUNBOPUCH-UHFFFAOYSA-N
L-Arginine Metabolite hmdb:HMDB0000517 chebi:16467;chebi:16467 inchikey:ODKSFYDXXFIFQN-BYPYZUCNSA-N
Oxygen Metabolite hmdb:HMDB0001377 chebi:15379;chebi:15379 inchikey:MYMOFIZGZYHOMD-UHFFFAOYSA-N
NOS3 (endothelial) GeneProduct ncbigene:4846 ensembl:ENSG00000164867 ncbigene:4846 hgnc.symbol:NOS3 uniprot:P29474;uniprot:H7C4V4;uniprot:E7ESA7
deoxy-hemoglobin GeneProduct ensembl:ENSG00000206172 ensembl:ENSG00000206172 ncbigene:3039 hgnc.symbol:HBA1 uniprot:P69905;uniprot:D1MGQ2;uniprot:G3V1N2
deoxy-myoglobin GeneProduct ncbigene:4151 ensembl:ENSG00000198125 ncbigene:4151 hgnc.symbol:MB uniprot:F2Z337;uniprot:B0QYF8;uniprot:Q8WVH6;uniprot:B0QYF7;uniprot:P02144;uniprot:A0A1K0FU49;uniprot:F2Z2F1
NOS1 (neuronal) GeneProduct ncbigene:4842 ensembl:ENSG00000089250 ncbigene:4842 hgnc.symbol:NOS1 uniprot:P29475;uniprot:B3VK56
COX1 GeneProduct ncbigene:4512 ensembl:ENSG00000198804 ncbigene:4512 hgnc.symbol:MT-CO1 uniprot:A0A1X7RBG2;uniprot:U5YWV7;uniprot:P00395
NOS2 (inducible) GeneProduct ncbigene:4843 ensembl:ENSG00000007171 ncbigene:4843 hgnc.symbol:NOS2 uniprot:A0A2R8YDS4;uniprot:P35228
XDH GeneProduct ensembl:ENSG00000158125 ensembl:ENSG00000158125 ncbigene:7498 hgnc.symbol:XDH uniprot:P47989
AOX1 Protein ensembl:ENSG00000138356 ensembl:ENSG00000138356 ncbigene:316 hgnc.symbol:AOX1 uniprot:C9J244;uniprot:Q06278;uniprot:H7BXF7;uniprot:H7C3Q1
Nitric oxide Metabolite hmdb:HMDB0003378 "" chebi:16480;chebi:16480 inchikey:MWUXSHHQAYIFBG-UHFFFAOYSA-N
Nitrate Metabolite hmdb:HMDB0002878 "" chebi:17632;chebi:17632 inchikey:NHNBFGGVMKEFGY-UHFFFAOYSA-N
Citrulline Metabolite hmdb:HMDB0000904 "" chebi:16349;chebi:16349 inchikey:RHGKLRLOHDJJDR-BYPYZUCNSA-N
VItamin C Metabolite hmdb:HMDB0000044 "" chebi:29073;chebi:29073 inchikey:CIWBSHSKHKDKBQ-JLAZNSOCSA-N
Nitrite Metabolite hmdb:HMDB0002786 "" chebi:25567;chebi:25567 inchikey:IOVCWXUNBOPUCH-UHFFFAOYSA-N
L-Arginine Metabolite hmdb:HMDB0000517 "" chebi:16467;chebi:16467 inchikey:ODKSFYDXXFIFQN-BYPYZUCNSA-N
Oxygen Metabolite hmdb:HMDB0001377 "" chebi:15379;chebi:15379 inchikey:MYMOFIZGZYHOMD-UHFFFAOYSA-N
NOS3 (endothelial) GeneProduct ncbigene:4846 "" ensembl:ENSG00000164867 ncbigene:4846 hgnc.symbol:NOS3 uniprot:P29474;uniprot:H7C4V4;uniprot:E7ESA7
Deoxy-hemoglobin GeneProduct ensembl:ENSG00000206172 "" ensembl:ENSG00000206172 ncbigene:3039 hgnc.symbol:HBA1 uniprot:P69905;uniprot:D1MGQ2;uniprot:G3V1N2
Deoxy-myoglobin GeneProduct ncbigene:4151 "" ensembl:ENSG00000198125 ncbigene:4151 hgnc.symbol:MB uniprot:F2Z337;uniprot:B0QYF8;uniprot:Q8WVH6;uniprot:B0QYF7;uniprot:P02144;uniprot:A0A1K0FU49;uniprot:F2Z2F1
NOS1 (neuronal) GeneProduct ncbigene:4842 "" ensembl:ENSG00000089250 ncbigene:4842 hgnc.symbol:NOS1 uniprot:P29475;uniprot:B3VK56
COX1 GeneProduct ncbigene:4512 "" ensembl:ENSG00000198804 ncbigene:4512 hgnc.symbol:MT-CO1 uniprot:A0A1X7RBG2;uniprot:U5YWV7;uniprot:P00395
NOS2 (inducible) GeneProduct ncbigene:4843 "" ensembl:ENSG00000007171 ncbigene:4843 hgnc.symbol:NOS2 uniprot:A0A2R8YDS4;uniprot:P35228
XDH GeneProduct ensembl:ENSG00000158125 "" ensembl:ENSG00000158125 ncbigene:7498 hgnc.symbol:XDH uniprot:P47989
AOX1 Protein ensembl:ENSG00000138356 "" ensembl:ENSG00000138356 ncbigene:316 hgnc.symbol:AOX1 uniprot:C9J244;uniprot:Q06278;uniprot:H7BXF7;uniprot:H7C3Q1
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