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Support Linux aarch64 #264

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Support Linux aarch64 #264

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10365f9
Add support for Linux ARM64
martin-g Sep 26, 2023
38034ea
Add CI based on Github Actions
martin-g Sep 26, 2023
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52 changes: 52 additions & 0 deletions .github/workflows/ci.yaml
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@@ -0,0 +1,52 @@
name: CI

on:
push:
branches:
- master
pull_request:
branches:
- master

jobs:
build:
name: Build on Linux x86_64
runs-on: ubuntu-latest

steps:
- name: Checkout
uses: actions/checkout@v4

- name: Install dependencies
run: |
sudo apt-get update
sudo apt-get install -y file

- name: Build
run: |
make -j all
file wtdbg2 | grep x86-64

build-aarch64:
name: Build on Linux aarch64
runs-on: ubuntu-latest

steps:
- name: Checkout
uses: actions/checkout@v4

- name: Build
uses: uraimo/run-on-arch-action@v2
with:
arch: aarch64
distro: ubuntu20.04
githubToken: ${{ github.token }}
dockerRunArgs: |
--volume "${PWD}:/wtdbg2"
install: |
apt-get update -q -y
apt-get install -q -y make gcc file zlib1g-dev
run: |
cd /wtdbg2
make -j all
file wtdbg2 | grep aarch64
11 changes: 9 additions & 2 deletions Makefile
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Expand Up @@ -8,10 +8,17 @@ ifeq (0, ${MAKELEVEL})
TIMESTAMP=$(shell date)
endif

ARCH := $(shell uname -m)
ifeq ($(ARCH), x86_64)
ARCH_CFLAGS=-mpopcnt -msse4.2
else ifeq ($(ARCH), aarch64)
ARCH_CFLAGS=
endif

ifeq (1, ${DEBUG})
CFLAGS=-g3 -W -Wall -Wno-unused-but-set-variable -O0 -DDEBUG=1 -DVERSION="$(VERSION)" -DRELEASE="$(RELEASE)" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -mpopcnt -msse4.2
CFLAGS=-g3 -W -Wall -Wno-unused-but-set-variable -O0 -DDEBUG=1 -DVERSION="$(VERSION)" -DRELEASE="$(RELEASE)" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE $(ARCH_CFLAGS)
else
CFLAGS=-g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="$(VERSION)" -DRELEASE="$(RELEASE)" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -mpopcnt -msse4.2
CFLAGS=-g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="$(VERSION)" -DRELEASE="$(RELEASE)" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE $(ARCH_CFLAGS)
endif

GLIBS=-lm -lrt -lpthread -lz
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7 changes: 6 additions & 1 deletion ksw.c
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Expand Up @@ -25,9 +25,14 @@

#include <stdlib.h>
#include <stdint.h>
#include <emmintrin.h>
#include "ksw.h"

#ifdef __x86_64__
#include <emmintrin.h>
#elif __aarch64__
#include "sse2neon.h"
#endif

#ifdef USE_MALLOC_WRAPPERS
# include "malloc_wrap.h"
#endif
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5 changes: 5 additions & 0 deletions poacns.h
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Expand Up @@ -25,8 +25,13 @@
#include "chararray.h"
#include "list.h"
#include "hashset.h"

#ifdef __x86_64__
#include <emmintrin.h>
#include <tmmintrin.h>
#elif __aarch64__
#include "sse2neon.h"
#endif

#if __BYTE_ORDER == 1234
//#pragma message(" ** " __FILE__ " has been tested in LITTLE_ENDIAN **\n")
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