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Dear all,
I am using the function hic_matrixplot to compare two hic matrices. And I also want to add the loops info of two samples (called by hiccups) into the plot. Yet, when I add a list of data.frame of loops into function hic_matrixplot, I met an error. So, I want to ask whether this feature has not been covered in this function.
Moreover, if I use hic_matrixplot to show one sample's hic matix, the loops features for one sample can do well.
The loops should be a data.frame with the columns 'chromosome1', 'start1', 'end1', 'chromosome2', 'start2', 'end2'. Or a list of such data.frames. Not sure why the documentation says 'BED-like data.frame', it is confusing.
Dear all,
I am using the function hic_matrixplot to compare two hic matrices. And I also want to add the loops info of two samples (called by hiccups) into the plot. Yet, when I add a list of data.frame of loops into function hic_matrixplot, I met an error. So, I want to ask whether this feature has not been covered in this function.
Moreover, if I use hic_matrixplot to show one sample's hic matix, the loops features for one sample can do well.
Cheers,
Guanchen
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