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Update RDAT file specs version #7

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rhiju opened this issue Aug 19, 2023 · 0 comments
Open
5 tasks

Update RDAT file specs version #7

rhiju opened this issue Aug 19, 2023 · 0 comments

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@rhiju
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rhiju commented Aug 19, 2023

RDAT format has been stable for several years now -- increment file format to 1.0? As a sanity check let's

  • Download all RDAT's from RMDB
  • Make sure all can be read in with Python3 code, and can get ANNOTATION field, number of sequences, and number of reactivity values into a single .csv file.
  • Do same .csv output with MATLAB code and check agreement.
  • Probably can deprecate TRACE.
  • Write out an updated specification for RDAT format, and store in this GitHub README rarther than at RMDB

@tkaragianes

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