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Problem about end-of-line sequence #702

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4 tasks done
hankeke303 opened this issue Jul 30, 2024 · 3 comments
Open
4 tasks done

Problem about end-of-line sequence #702

hankeke303 opened this issue Jul 30, 2024 · 3 comments
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🐛 bug Something isn't working

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@hankeke303
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hankeke303 commented Jul 30, 2024 •
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Describe the bug

In some cases of SWE-bench Lite, there are some files with line endings of \r\n in a specific commit of the code repository, which may cause some lines that should end with \r\n to appear in the generated patch.
This often happens when new subdirectories or new files are created in the repository directory during the environment build process. In this case, the patch will record these new files as modifications made by the agent.
The problem is here: for unclear reasons, the patch with the correct line endings recorded in docker has all line endings changed to \n when it is sent to the Python program. As a result, all the line endings in the patch obtained by the program are all \n, regardless of whether they should be \r\n. (I can confirm that the line endings of the patch in docker are correct)
However, in the evaluation program of SWE-bench, these cases will also have the same new files with line endings of \r\n after the environment is built. Due to the problem of line ending sequence, an error will be reported because the newly added files in the patch are different from the existing files and cannot be automatically skipped when patching (originally they would be skipped if they were the same).

Steps/commands/code to Reproduce

An example where this problem occurs is the case psf__requests-863.
When building the environment, we need to run python -m pip install ., which will generate a build/ directory in the root directory of the repository, which contains many files with \r\n as the line ending sequence, such as build/lib/requests/packages/chardet2/__init__.py.
As mentioned earlier, the Python program will eventually generate a patch with a line ending sequence of completely \n, so the patch cannot be successfully applied when testing with SWE-bench Lite.
The relevant commands are as follows:

# Inference
python run.py \
    --model_name gpt4o \
    --split test \
    --instance_filter "psf__requests-863" \
    --per_instance_cost_limit 2.00 \
    --config_file ./config/default.yaml

# Evaluation
python -m swebench.harness.run_evaluation \
    --dataset_name princeton-nlp/SWE-bench_Lite \
    --split test\
    --predictions_path ~/data/SWE-agent/trajectories/xxx/gpt4o__SWE-bench_Lite__default__t-0.00__p-0.95__c-2.00__install-1/all_preds.jsonl \
    --max_workers 1 \
    --run_id sweagent_gpt4o \
    --instance_ids psf__requests-863

The error result could be seen in the picture below, where the line ending is the patch of the specific file is only \n:

the error line ending

BTW, the line ending sequence in the official all_pred.jsonl provided by SWE-agent (https://github.com/swe-bench/experiments/blob/main/evaluation/lite/20240603_sweagent_gpt4o/all_preds.jsonl) is correct(in the picture below). Could it be a problem related to my local environment?

the correct line ending

Error message/results

There are no issue about the trajectory file. Here is the error when applying the patch.

2024-07-30 18:20:33,914 - INFO - Environment image sweb.env.x86_64.1f92e6d7cef88badc4f744:latest found for psf__requests-863
Building instance image sweb.eval.x86_64.psf__requests-863:latest for psf__requests-863
2024-07-30 18:20:43,367 - INFO - Creating container for psf__requests-863...
2024-07-30 18:20:43,387 - INFO - Container for psf__requests-863 created: cede5065e454b498349cf4eee9acd06c5d1ef96f85546a0ccd7011dbe74031c0
2024-07-30 18:20:43,790 - INFO - Container for psf__requests-863 started: cede5065e454b498349cf4eee9acd06c5d1ef96f85546a0ccd7011dbe74031c0
2024-07-30 18:20:43,796 - INFO - Intermediate patch for psf__requests-863 written to logs/run_evaluation/sweagent_gpt4o/gpt4o__SWE-bench_Lite__default__t-0.00__p-0.95__c-2.00__install-1/psf__requests-863/patch.diff, now applying to container...
2024-07-30 18:20:44,357 - INFO - Failed to apply patch to container, trying again...
2024-07-30 18:20:44,528 - INFO - >>>>> Patch Apply Failed:
The next patch would create the file build/lib/requests/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/__init__.py
The next patch would create the file build/lib/requests/_oauth.py,
which already exists!  Assuming -R.
patching file build/lib/requests/_oauth.py
The next patch would create the file build/lib/requests/api.py,
which already exists!  Assuming -R.
patching file build/lib/requests/api.py
The next patch would empty out the file build/lib/requests/async.py,
which is already empty!  Assuming -R.
patching file build/lib/requests/async.py
The next patch would create the file build/lib/requests/auth.py,
which already exists!  Assuming -R.
patching file build/lib/requests/auth.py
The next patch would create the file build/lib/requests/cacert.pem,
which already exists!  Assuming -R.
patching file build/lib/requests/cacert.pem
The next patch would create the file build/lib/requests/certs.py,
which already exists!  Assuming -R.
patching file build/lib/requests/certs.py
The next patch would create the file build/lib/requests/compat.py,
which already exists!  Assuming -R.
patching file build/lib/requests/compat.py
The next patch would create the file build/lib/requests/cookies.py,
which already exists!  Assuming -R.
patching file build/lib/requests/cookies.py
The next patch would create the file build/lib/requests/defaults.py,
which already exists!  Assuming -R.
patching file build/lib/requests/defaults.py
The next patch would create the file build/lib/requests/exceptions.py,
which already exists!  Assuming -R.
patching file build/lib/requests/exceptions.py
The next patch would create the file build/lib/requests/hooks.py,
which already exists!  Assuming -R.
patching file build/lib/requests/hooks.py
The next patch would create the file build/lib/requests/models.py,
which already exists!  Assuming -R.
patching file build/lib/requests/models.py
The next patch would create the file build/lib/requests/packages/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/__init__.py
The next patch would create the file build/lib/requests/packages/chardet2/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/__init__.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/__init__.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/__init__.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/big5freq.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/big5freq.py
The next patch would create the file build/lib/requests/packages/chardet2/big5prober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/big5prober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/big5prober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/big5prober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/chardistribution.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/chardistribution.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/chardistribution.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/chardistribution.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/charsetgroupprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/charsetgroupprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/charsetgroupprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/charsetgroupprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/charsetprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/charsetprober.py
The next patch would create the file build/lib/requests/packages/chardet2/codingstatemachine.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/codingstatemachine.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/codingstatemachine.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/codingstatemachine.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/constants.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/constants.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/constants.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/constants.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/escprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/escprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/escprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/escprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/escsm.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/escsm.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/escsm.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/escsm.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/eucjpprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/eucjpprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/eucjpprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/eucjpprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/euckrfreq.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/euckrfreq.py
The next patch would create the file build/lib/requests/packages/chardet2/euckrprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/euckrprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/euckrprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/euckrprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/euctwfreq.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/euctwfreq.py
The next patch would create the file build/lib/requests/packages/chardet2/euctwprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/euctwprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/euctwprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/euctwprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/gb2312freq.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/gb2312freq.py
The next patch would create the file build/lib/requests/packages/chardet2/gb2312prober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/gb2312prober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/gb2312prober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/gb2312prober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/hebrewprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/hebrewprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/hebrewprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/hebrewprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/jisfreq.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/jisfreq.py
The next patch would create the file build/lib/requests/packages/chardet2/jpcntx.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/jpcntx.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/jpcntx.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/jpcntx.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langbulgarianmodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langbulgarianmodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langbulgarianmodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langbulgarianmodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langcyrillicmodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langcyrillicmodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langcyrillicmodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langcyrillicmodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langgreekmodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langgreekmodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langgreekmodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langgreekmodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langhebrewmodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langhebrewmodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langhebrewmodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langhebrewmodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langhungarianmodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langhungarianmodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langhungarianmodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langhungarianmodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langthaimodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langthaimodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langthaimodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langthaimodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/latin1prober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/latin1prober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/latin1prober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/latin1prober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/mbcharsetprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/mbcharsetprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/mbcharsetprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/mbcharsetprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/mbcsgroupprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/mbcsgroupprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/mbcsgroupprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/mbcsgroupprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/mbcssm.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/mbcssm.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/mbcssm.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/mbcssm.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/sbcharsetprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/sbcharsetprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/sbcharsetprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/sbcharsetprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/sbcsgroupprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/sbcsgroupprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/sbcsgroupprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/sbcsgroupprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/sjisprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/sjisprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/sjisprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/sjisprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/test.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/test.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/test.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/test.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/universaldetector.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/universaldetector.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/universaldetector.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/universaldetector.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/utf8prober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/utf8prober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/utf8prober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/utf8prober.py.rej
The next patch would create the file build/lib/requests/packages/urllib3/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/__init__.py
The next patch would create the file build/lib/requests/packages/urllib3/_collections.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/_collections.py
The next patch would create the file build/lib/requests/packages/urllib3/connectionpool.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/connectionpool.py
The next patch would create the file build/lib/requests/packages/urllib3/exceptions.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/exceptions.py
The next patch would create the file build/lib/requests/packages/urllib3/filepost.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/filepost.py
The next patch would create the file build/lib/requests/packages/urllib3/packages/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/packages/__init__.py
The next patch would create the file build/lib/requests/packages/urllib3/packages/ordered_dict.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/packages/ordered_dict.py
The next patch would create the file build/lib/requests/packages/urllib3/packages/six.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/packages/six.py
The next patch would create the file build/lib/requests/packages/urllib3/packages/ssl_match_hostname/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/packages/ssl_match_hostname/__init__.py
The next patch would create the file build/lib/requests/packages/urllib3/poolmanager.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/poolmanager.py
The next patch would create the file build/lib/requests/packages/urllib3/request.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/request.py
The next patch would create the file build/lib/requests/packages/urllib3/response.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/response.py
The next patch would create the file build/lib/requests/packages/urllib3/util.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/util.py
The next patch would create the file build/lib/requests/safe_mode.py,
which already exists!  Assuming -R.
patching file build/lib/requests/safe_mode.py
The next patch would create the file build/lib/requests/sessions.py,
which already exists!  Assuming -R.
patching file build/lib/requests/sessions.py
The next patch would create the file build/lib/requests/status_codes.py,
which already exists!  Assuming -R.
patching file build/lib/requests/status_codes.py
The next patch would create the file build/lib/requests/structures.py,
which already exists!  Assuming -R.
patching file build/lib/requests/structures.py
The next patch would create the file build/lib/requests/utils.py,
which already exists!  Assuming -R.
patching file build/lib/requests/utils.py
patching file requests/models.py
patching file tests/test_requests.py

2024-07-30 18:20:44,532 - INFO - Traceback (most recent call last):
  File "/hdd1/zzr/SWE-bench/swebench/harness/run_evaluation.py", line 134, in run_instance
    raise EvaluationError(
EvaluationError: Evaluation error for psf__requests-863: >>>>> Patch Apply Failed:
The next patch would create the file build/lib/requests/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/__init__.py
The next patch would create the file build/lib/requests/_oauth.py,
which already exists!  Assuming -R.
patching file build/lib/requests/_oauth.py
The next patch would create the file build/lib/requests/api.py,
which already exists!  Assuming -R.
patching file build/lib/requests/api.py
The next patch would empty out the file build/lib/requests/async.py,
which is already empty!  Assuming -R.
patching file build/lib/requests/async.py
The next patch would create the file build/lib/requests/auth.py,
which already exists!  Assuming -R.
patching file build/lib/requests/auth.py
The next patch would create the file build/lib/requests/cacert.pem,
which already exists!  Assuming -R.
patching file build/lib/requests/cacert.pem
The next patch would create the file build/lib/requests/certs.py,
which already exists!  Assuming -R.
patching file build/lib/requests/certs.py
The next patch would create the file build/lib/requests/compat.py,
which already exists!  Assuming -R.
patching file build/lib/requests/compat.py
The next patch would create the file build/lib/requests/cookies.py,
which already exists!  Assuming -R.
patching file build/lib/requests/cookies.py
The next patch would create the file build/lib/requests/defaults.py,
which already exists!  Assuming -R.
patching file build/lib/requests/defaults.py
The next patch would create the file build/lib/requests/exceptions.py,
which already exists!  Assuming -R.
patching file build/lib/requests/exceptions.py
The next patch would create the file build/lib/requests/hooks.py,
which already exists!  Assuming -R.
patching file build/lib/requests/hooks.py
The next patch would create the file build/lib/requests/models.py,
which already exists!  Assuming -R.
patching file build/lib/requests/models.py
The next patch would create the file build/lib/requests/packages/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/__init__.py
The next patch would create the file build/lib/requests/packages/chardet2/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/__init__.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/__init__.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/__init__.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/big5freq.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/big5freq.py
The next patch would create the file build/lib/requests/packages/chardet2/big5prober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/big5prober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/big5prober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/big5prober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/chardistribution.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/chardistribution.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/chardistribution.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/chardistribution.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/charsetgroupprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/charsetgroupprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/charsetgroupprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/charsetgroupprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/charsetprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/charsetprober.py
The next patch would create the file build/lib/requests/packages/chardet2/codingstatemachine.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/codingstatemachine.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/codingstatemachine.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/codingstatemachine.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/constants.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/constants.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/constants.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/constants.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/escprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/escprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/escprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/escprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/escsm.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/escsm.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/escsm.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/escsm.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/eucjpprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/eucjpprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/eucjpprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/eucjpprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/euckrfreq.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/euckrfreq.py
The next patch would create the file build/lib/requests/packages/chardet2/euckrprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/euckrprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/euckrprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/euckrprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/euctwfreq.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/euctwfreq.py
The next patch would create the file build/lib/requests/packages/chardet2/euctwprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/euctwprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/euctwprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/euctwprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/gb2312freq.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/gb2312freq.py
The next patch would create the file build/lib/requests/packages/chardet2/gb2312prober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/gb2312prober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/gb2312prober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/gb2312prober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/hebrewprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/hebrewprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/hebrewprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/hebrewprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/jisfreq.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/jisfreq.py
The next patch would create the file build/lib/requests/packages/chardet2/jpcntx.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/jpcntx.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/jpcntx.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/jpcntx.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langbulgarianmodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langbulgarianmodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langbulgarianmodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langbulgarianmodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langcyrillicmodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langcyrillicmodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langcyrillicmodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langcyrillicmodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langgreekmodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langgreekmodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langgreekmodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langgreekmodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langhebrewmodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langhebrewmodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langhebrewmodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langhebrewmodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langhungarianmodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langhungarianmodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langhungarianmodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langhungarianmodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/langthaimodel.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/langthaimodel.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/langthaimodel.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/langthaimodel.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/latin1prober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/latin1prober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/latin1prober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/latin1prober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/mbcharsetprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/mbcharsetprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/mbcharsetprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/mbcharsetprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/mbcsgroupprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/mbcsgroupprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/mbcsgroupprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/mbcsgroupprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/mbcssm.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/mbcssm.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/mbcssm.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/mbcssm.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/sbcharsetprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/sbcharsetprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/sbcharsetprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/sbcharsetprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/sbcsgroupprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/sbcsgroupprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/sbcsgroupprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/sbcsgroupprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/sjisprober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/sjisprober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/sjisprober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/sjisprober.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/test.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/test.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/test.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/test.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/universaldetector.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/universaldetector.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/universaldetector.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/universaldetector.py.rej
The next patch would create the file build/lib/requests/packages/chardet2/utf8prober.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/chardet2/utf8prober.py
Hunk #1 FAILED at 1 (different line endings).
Not deleting file build/lib/requests/packages/chardet2/utf8prober.py as content differs from patch
1 out of 1 hunk FAILED -- saving rejects to file build/lib/requests/packages/chardet2/utf8prober.py.rej
The next patch would create the file build/lib/requests/packages/urllib3/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/__init__.py
The next patch would create the file build/lib/requests/packages/urllib3/_collections.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/_collections.py
The next patch would create the file build/lib/requests/packages/urllib3/connectionpool.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/connectionpool.py
The next patch would create the file build/lib/requests/packages/urllib3/exceptions.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/exceptions.py
The next patch would create the file build/lib/requests/packages/urllib3/filepost.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/filepost.py
The next patch would create the file build/lib/requests/packages/urllib3/packages/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/packages/__init__.py
The next patch would create the file build/lib/requests/packages/urllib3/packages/ordered_dict.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/packages/ordered_dict.py
The next patch would create the file build/lib/requests/packages/urllib3/packages/six.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/packages/six.py
The next patch would create the file build/lib/requests/packages/urllib3/packages/ssl_match_hostname/__init__.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/packages/ssl_match_hostname/__init__.py
The next patch would create the file build/lib/requests/packages/urllib3/poolmanager.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/poolmanager.py
The next patch would create the file build/lib/requests/packages/urllib3/request.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/request.py
The next patch would create the file build/lib/requests/packages/urllib3/response.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/response.py
The next patch would create the file build/lib/requests/packages/urllib3/util.py,
which already exists!  Assuming -R.
patching file build/lib/requests/packages/urllib3/util.py
The next patch would create the file build/lib/requests/safe_mode.py,
which already exists!  Assuming -R.
patching file build/lib/requests/safe_mode.py
The next patch would create the file build/lib/requests/sessions.py,
which already exists!  Assuming -R.
patching file build/lib/requests/sessions.py
The next patch would create the file build/lib/requests/status_codes.py,
which already exists!  Assuming -R.
patching file build/lib/requests/status_codes.py
The next patch would create the file build/lib/requests/structures.py,
which already exists!  Assuming -R.
patching file build/lib/requests/structures.py
The next patch would create the file build/lib/requests/utils.py,
which already exists!  Assuming -R.
patching file build/lib/requests/utils.py
patching file requests/models.py
patching file tests/test_requests.py

Check (logs/run_evaluation/sweagent_gpt4o_local_2/gpt4o__SWE-bench_Lite__default__t-0.00__p-0.95__c-2.00__install-1/psf__requests-863/run_instance.log) for more information.

2024-07-30 18:20:44,533 - INFO - Attempting to stop container sweb.eval.psf__requests-863.sweagent_gpt4o_local_2...
2024-07-30 18:20:59,791 - INFO - Attempting to remove container sweb.eval.psf__requests-863.sweagent_gpt4o_local_2...
2024-07-30 18:20:59,809 - INFO - Container sweb.eval.psf__requests-863.sweagent_gpt4o_local_2 removed.
2024-07-30 18:20:59,809 - INFO - Attempting to remove image sweb.eval.x86_64.psf__requests-863:latest...
2024-07-30 18:20:59,845 - INFO - Image sweb.eval.x86_64.psf__requests-863:latest removed.

System Information

Ubuntu 22.04.1 LTS, Python 3.12.4, swebench 2.0.12

Checklist

  • I'm running with the latest docker container/on the latest development version (this means running both git pull and docker pull sweagent/swe-agent:latest)
  • I have copied the full command/code that I ran (as text, not as screenshot!)
  • If applicable: I have copied the full log file/error message that was the result (as text, not as screenshot!)
  • I have enclosed code/log messages in triple backticks (docs) and clicked "Preview" to make sure it's displayed correctly.
@ofirpress
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Hi this seems like a swe-bench issue, could you please file it there? https://github.com/princeton-nlp/SWE-bench
thanks a bunch for finding this

@hankeke303
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Hi this seems like a swe-bench issue, could you please file it there? https://github.com/princeton-nlp/SWE-bench thanks a bunch for finding this

I'm sorry, but I think this issue arises from the CRLF being uniformly replaced with LF during communication in SWE-agent between the docker and the Python program, and it is not related to SWE-bench (any other project, if it has files with CRLF line endings that need to appear in the patch, would also encounter the same issue), it's just that I discovered this problem through the evaluation program of SWE-bench.

Thank you for your time.

@ofirpress
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ah ok thanks. @klieret is coming back from vacation soon and will look at this then. thanks for filing

@klieret klieret added the 🐛 bug Something isn't working label Aug 10, 2024
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@klieret @ofirpress @hankeke303