Neuroimaging zombies

[EliDillies]

Title

Neuroimaging zombies

Short description and the goals for the OHBM BrainHack

The Neuroimaging zombies projects aims at providing guidelines on how to test whether an effect from the literature is replicable (more than reproducible), and how to prevent our own results to turn into irreplicable effects.

We propose to work on our 3 axes:

• preprocess a public dataset with your favourite tool and upload the results to GIN
• work on reference Quality Control
• work on the reference pipelines for some well established neuroimaging results

Join our Mattermost channel at brainhack.org, and check these slides to learn more about the project at osf.io.

Link to the Project

https://github.com/neuroanatomy/neuroimaging-zombies-ohbm-2024/

Image/Logo for the OHBM brainhack website

https://upload.wikimedia.org/wikipedia/commons/8/8d/MOREmoji_zombie.svg

Project lead

Elisabeth Dillies, brainhack mattermost: eli
Roberto Toro, brainhack mattermost: r03ert0
Katja Heuer, brainhack mattermost: katja
Nicolas Traut, brainhack mattermost: ntraut
Anita Beggiato, brainhack mattermost: nta

Main Hub

Hybrid (Europe / Middle East / Africa)

Link to the Project pitch

No response

Other hubs covered by the leaders

• Seoul
• Hybrid (Asia / Pacific)
• Hybrid (Europe / Middle East / Africa)
• Hybrid (Americas)

Skills

Depending on which subproject you wish to be involved in, it can be helpful to have basic knowledge on:

• bash/terminal & git
• preprocessing tools
• quality control

But the most required skill is enthusiasm about discussion and open science!

Recommended tutorials for new contributors

Datalad handbook: https://handbook.datalad.org/en/latest/basics/intro.html (not mandatory at all)

Good first issues

No response

Twitter summary

No response

Short name for the Discord chat channel (~15 chars)

brainhack mattermost channel: neuroimaging-zombies

Please read and follow the OHBM Code of Conduct

• I agree to follow the OHBM Code of Conduct during the hackathon

[sina-mansour]

@EliDillies many thanks for submitting this project for the 2024 Brainhack!

As you have indicated the project will also be made available in a hybrid format, we encourage recording a short project pitch to be made available to online participants. (we can provide a link to the recorded pitch on the brainhack website)

Other than that all looks good to go 👍

[danieltomasz]

@EliDillies do you focus on MRI/fMRI, or you plan to include EEG/MEG as well? (as I understood this will depend on participants' choice)

[EliDillies]

@EliDillies do you focus on MRI/fMRI, or you plan to include EEG/MEG as well? (as I understood this will depend on participants' choice)

The project mainly focuses on MRI/fMRI data for now
@danieltomasz However, if you feel this project is relevant to EEG/MEG data as well, you are very welcome to get involved and extend it!