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Upgrade simpleaf and alevinqc #361

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Upgrade simpleaf and alevinqc #361

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Commits on Aug 14, 2024

  1. update simpleaf +alevinqc version

    @an-altosian
    an-altosian committed Aug 14, 2024
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  2. replace all 'salmon_index' with 'simpleaf_index' and no_piscem into s… 

    …chema
    @DongzeHE
    DongzeHE committed Aug 14, 2024
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  3. add alevin-fry and simpleaf citation

    @DongzeHE
    DongzeHE committed Aug 14, 2024
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  4. add selective alignment option to simpleaf

    @DongzeHE
    DongzeHE committed Aug 14, 2024
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  5. add selective alignment option to simpleaf

    @DongzeHE
    DongzeHE committed Aug 14, 2024
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Commits on Aug 15, 2024

  1. add newline to the end of simpleaf_index and simpleaf_quant

    @DongzeHE
    DongzeHE committed Aug 15, 2024
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  2. nf-core lint --fix files_unchanged

    @DongzeHE
    DongzeHE committed Aug 15, 2024
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