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Update simpleaf to 0.17.2 #6319

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Update simpleaf to 0.17.2 #6319

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Commits on Aug 25, 2024

  1. update simpleaf index

    @DongzeHE
    DongzeHE committed Aug 25, 2024
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Commits on Aug 26, 2024

  1. update simpleaf quant main

    @DongzeHE
    DongzeHE committed Aug 26, 2024
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  2. update simpleaf quant test

    @DongzeHE
    DongzeHE committed Aug 26, 2024
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Commits on Sep 2, 2024

  1. Merge branch 'nf-core:master' into master

    @DongzeHE
    DongzeHE committed Sep 2, 2024
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Commits on Sep 4, 2024

  1. propose the new quant process strucure

    @an-altosian
    an-altosian committed Sep 4, 2024
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  2. Merge branch 'nf-core:master' into master

    @DongzeHE
    DongzeHE committed Sep 4, 2024
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  3. simpleaf index input and output definition

    @an-altosian
    an-altosian committed Sep 4, 2024
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  4. reformat meta.yml

    @an-altosian
    an-altosian committed Sep 4, 2024
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Commits on Sep 5, 2024

  1. add permitlistOption function for simpleaf quant

    @an-altosian
    an-altosian committed Sep 5, 2024
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  2. run nf-core test

    @an-altosian
    an-altosian committed Sep 5, 2024
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  3. remove optional flag for output channel of t2g_3col.tsv of simpleaf i… 

    …ndex
    @an-altosian
    an-altosian committed Sep 5, 2024
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  4. improve meta.yml

    @an-altosian
    an-altosian committed Sep 5, 2024
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Commits on Sep 6, 2024

  1. Merge branch 'master' into master

    @SPPearce
    SPPearce committed Sep 6, 2024
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  2. Merge branch 'master' into master

    @SPPearce
    SPPearce committed Sep 6, 2024
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  3. Merge branch 'nf-core:master' into master

    @an-altosian
    an-altosian committed Sep 6, 2024
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  4. update snapshot and make t2g file optional

    @an-altosian
    an-altosian committed Sep 6, 2024
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  5. make prettier happy

    @an-altosian
    an-altosian committed Sep 6, 2024
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  6. add end line to files

    @an-altosian
    an-altosian committed Sep 6, 2024
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  7. improve meta.yml more

    @an-altosian
    an-altosian committed Sep 6, 2024
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  8. make prettier happy

    @an-altosian
    an-altosian committed Sep 6, 2024
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  9. Merge branch 'master' into master

    @an-altosian
    an-altosian committed Sep 6, 2024
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  10. remove ending space

    @an-altosian
    an-altosian committed Sep 6, 2024
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  11. Merge branch 'master' of https://github.com/DongzeHE/modules

    @an-altosian
    an-altosian committed Sep 6, 2024
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  12. remote tailing space

    @an-altosian
    an-altosian committed Sep 6, 2024
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  13. remove duplicated mdd5 sum

    @an-altosian
    an-altosian committed Sep 6, 2024
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  14. tests PASSED locally

    @an-altosian
    an-altosian committed Sep 6, 2024
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  15. update versions.yml

    @an-altosian
    an-altosian committed Sep 6, 2024
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  16. update versions.yml

    @an-altosian
    an-altosian committed Sep 6, 2024
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Commits on Sep 9, 2024

  1. all tests passed locally

    @an-altosian
    an-altosian committed Sep 9, 2024
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Commits on Sep 10, 2024

  1. fix piscem version

    @an-altosian
    an-altosian committed Sep 10, 2024
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