Skip to content

[4.0] - 2024-04-23 Ascendio
Compare
Choose a tag to compare
@ggabernet ggabernet released this 23 Apr 15:53
· 38 commits to master since this release
4.0
2f492b0
This commit was created on GitHub.com and signed with GitHub’s verified signature.
GPG key ID: B5690EEEBB952194
Learn about vigilant mode.

Added

  • #319 Added AIRR compliance badge

Fixed

  • #319 Fix test full profile and nebnext_umi_tcr profile.
  • #321 Label Dowser tips by isotype instead of c_call by default.
  • #322 Use RAxML as the default builder for dowser. Skip lineage trees by default.

Dependencies

Dependency Old version New version
enchantr 0.1.11 0.1.14

Deprecated parameters

  • --skip_lineage_trees is now deprecated in favor of --lineage_trees. Lineage trees are skipped by default.
  • --igphyml parameter is deprecated in favor of --lineage_tree_exec. All lineage tree building software part of Dowser are now supported.
  • --igblast_base is deprecated in favor of --reference_igblast.
  • --imgtdb_base is depracated in favor of --reference_fasta.
Assets 2
Loading