Add assembled check to samplesheet, fix report use read_rearrangement · nf-core/airrflow@4adcc54

Triggered via pull request July 18, 2023 20:45

ggabernet

synchronize #266

ggabernet:dev

Status Failure

Total duration 1h 8m 2s

Artifacts 1

ci.yml

on: pull_request

Matrix: Run pipeline with test data

Matrix: Run workflow test with different profiles

2 errors and 4 warnings

Process completed with exit code 1.

Process completed with exit code 1.

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

There are over 10,000 files in this artifact, consider creating an archive before upload to improve the upload performance.

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

There are over 10,000 files in this artifact, consider creating an archive before upload to improve the upload performance.

Produced during runtime

Name	Size
logs-test_fetchimgt Expired	1.11 GB