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include MiXCR toolkit in nf-core/airrflow #1248

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include MiXCR toolkit in nf-core/airrflow

include MiXCR toolkit in nf-core/airrflow #1248

Triggered via pull request September 23, 2024 13:01
@mapo9mapo9
opened #346
mapo9:mixcr
Status Cancelled
Total duration 8m 20s
Artifacts –

ci.yml

on: pull_request
Matrix: Run pipeline with test data
Matrix: Run workflow test with different profiles
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30 errors
Run workflow test with different profiles (23.04.0, test_assembled_hs)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_no_umi)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_nebnext_umi)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_nocluster)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_nocluster)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_mixcr_sc)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_no_umi)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_mixcr_sc)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_fetchimgt)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_mixcr_bulk)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_fetchimgt)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_10x_sc)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_assembled_hs)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_tcr)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_rnaseq_bulk)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_rnaseq_sc)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_10x_sc)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_nebnext_umi)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_assembled_mm)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_assembled_mm)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_mixcr_bulk)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_clontech_umi)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_rnaseq_sc)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_tcr)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (23.04.0, test_clontech_umi)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run workflow test with different profiles (latest-everything, test_rnaseq_bulk)
This request has been automatically failed because it uses a deprecated version of `actions/upload-artifact: v2`. Learn more: https://github.blog/changelog/2024-02-13-deprecation-notice-v1-and-v2-of-the-artifact-actions/
Run pipeline with test data (23.04.0)
Canceling since a higher priority waiting request for 'nf-core CI-346' exists
Run pipeline with test data (23.04.0)
The operation was canceled.
Run pipeline with test data (latest-everything)
Canceling since a higher priority waiting request for 'nf-core CI-346' exists
Run pipeline with test data (latest-everything)
The operation was canceled.