From 7345ad7b404bb806da53eadaf7e519796da0c00f Mon Sep 17 00:00:00 2001
From: "A.s." <62971995+adRn-s@users.noreply.github.com>
Date: Mon, 16 Sep 2024 16:13:19 +0200
Subject: [PATCH] got cd?

---
 .github/workflows/deploy.yml | 8 +++-----
 1 file changed, 3 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml
index 3c1ed6f..859e5ce 100644
--- a/.github/workflows/deploy.yml
+++ b/.github/workflows/deploy.yml
@@ -33,12 +33,10 @@ jobs:
           #cache-env: true
       - name: MicromambaActivateEnv
         run: micromamba activate Rseurat
-      - name: RemoteInstallGH
+      - name: InstallSeuratDatasets
         run: |
-          apt update && apt install -y libicu-dev libicu58
-          Rscript -e "remotes::install_github('satijalab/seurat-data')"
-          Rscript -e "SeuratData::InstallData('ifnb')"  # if this fails, download file.tar.gz w/ cURL, then install.packages('file.tar.gz', repos=NULL, type='source')
-          Rscript -e "SeuratData::InstallData('pbmc3k')"
+          Rscript -e "install.packages(pkgs='ifnb.SeuratData', repos='https://seurat.nygenome.org/', type='source')"
+          Rscript -e "install.packages(pkgs='pbmc3k.SeuratData', repos='https://seurat.nygenome.org/', type='source')"
       - name: DownloadZenodo
         working-directory: ./rmd
         run: |