{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":588661691,"defaultBranch":"main","name":"2023_tutorial_ChIP-seq","ownerLogin":"kalavattam","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-01-13T17:12:57.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/34422552?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1673997727.80234","currentOid":""},"activityList":{"items":[{"before":"5d995ef75fe8f0f329e3f61cb9ad2eefb456f2ee","after":"3fbab89cdd727582e034c157ef2abd7778ca2115","ref":"refs/heads/main","pushedAt":"2024-06-12T15:52:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kalavattam","name":"Kris Alavattam","path":"/kalavattam","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34422552?s=80&v=4"},"commit":{"message":"Building out pipeline in align_process_etc.sh, tutorial.md, and notebooks for coverage and scaling.","shortMessageHtmlLink":"Building out pipeline in align_process_etc.sh, tutorial.md, and noteb…"}},{"before":"ad33d7ca493f45f99af1c16f9d296a326bd4a598","after":"5d995ef75fe8f0f329e3f61cb9ad2eefb456f2ee","ref":"refs/heads/main","pushedAt":"2024-05-31T17:42:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kalavattam","name":"Kris Alavattam","path":"/kalavattam","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34422552?s=80&v=4"},"commit":{"message":"Updates to alignment/processing/etc. script and Markdown tutorial for calling that script.","shortMessageHtmlLink":"Updates to alignment/processing/etc. script and Markdown tutorial for…"}},{"before":"62e70a23bc52bf02e5fbeb5ea6805704e3580b98","after":"ad33d7ca493f45f99af1c16f9d296a326bd4a598","ref":"refs/heads/main","pushedAt":"2024-05-23T22:04:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kalavattam","name":"Kris Alavattam","path":"/kalavattam","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34422552?s=80&v=4"},"commit":{"message":"Updating and to work with both single- and paired-end FASTQ files","shortMessageHtmlLink":"Updating and to work with both single- and paired-end FASTQ files"}},{"before":"e65591e7172b72c89aa0d06f18b271449a1e2f9e","after":"62e70a23bc52bf02e5fbeb5ea6805704e3580b98","ref":"refs/heads/main","pushedAt":"2024-05-22T20:01:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kalavattam","name":"Kris Alavattam","path":"/kalavattam","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34422552?s=80&v=4"},"commit":{"message":"Pushing work from the last greater-than-one-month; repo has become a bit of a mess, and much of this will be culled and reorganized in time, but pushing it all now for posterity","shortMessageHtmlLink":"Pushing work from the last greater-than-one-month; repo has become a …"}},{"before":"689b184b54cbaf761596345582cc1f0cc6f7e70f","after":"e65591e7172b72c89aa0d06f18b271449a1e2f9e","ref":"refs/heads/main","pushedAt":"2024-04-16T16:43:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kalavattam","name":"Kris Alavattam","path":"/kalavattam","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34422552?s=80&v=4"},"commit":{"message":"Pushing work from the last >1 week, which includes tests of phantompeakqualtools and alignment tallying for 'default' spike-in scaling factor calculations (as opposed to siQ-ChIP scaling factor calculations)","shortMessageHtmlLink":"Pushing work from the last >1 week, which includes tests of phantompe…"}},{"before":"bd71c09436ace11926f1e4b1fbe2aecbfa8d5ca6","after":"689b184b54cbaf761596345582cc1f0cc6f7e70f","ref":"refs/heads/main","pushedAt":"2024-04-04T16:52:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kalavattam","name":"Kris Alavattam","path":"/kalavattam","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34422552?s=80&v=4"},"commit":{"message":"Pushing work from the last several weeks, including extensive tests with siQ-ChIP","shortMessageHtmlLink":"Pushing work from the last several weeks, including extensive tests w…"}},{"before":"ecf547c9a7fa8fd929fa82fbbcfefb05da9a680d","after":"bd71c09436ace11926f1e4b1fbe2aecbfa8d5ca6","ref":"refs/heads/main","pushedAt":"2024-03-11T19:47:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kalavattam","name":"Kris Alavattam","path":"/kalavattam","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34422552?s=80&v=4"},"commit":{"message":"Added descriptions to the code chunks under section #5","shortMessageHtmlLink":"Added descriptions to the code chunks under section #5"}},{"before":"6236e05b9ab949b461a29fae5af07dfca989fa46","after":"ecf547c9a7fa8fd929fa82fbbcfefb05da9a680d","ref":"refs/heads/main","pushedAt":"2024-03-11T18:22:46.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"kalavattam","name":"Kris Alavattam","path":"/kalavattam","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34422552?s=80&v=4"},"commit":{"message":"Finally pushing the last couple weeks of work (but not the scratch work) to the tutorial repo; this work concerned various set operations with ChIP-seq MACS3 peak sets (Rachel's data: Esa1, Gcn5, and Rpd3)","shortMessageHtmlLink":"Finally pushing the last couple weeks of work (but not the scratch wo…"}},{"before":"e7d05e4f68a5ddcc4269ab5aa185be83bccffb12","after":"6236e05b9ab949b461a29fae5af07dfca989fa46","ref":"refs/heads/main","pushedAt":"2024-03-11T18:02:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kalavattam","name":"Kris Alavattam","path":"/kalavattam","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34422552?s=80&v=4"},"commit":{"message":"Delete old, out-of-date notebook","shortMessageHtmlLink":"Delete old, out-of-date notebook"}},{"before":"5cf752c6275f85544299955bc0cd7f7e90628c98","after":"e7d05e4f68a5ddcc4269ab5aa185be83bccffb12","ref":"refs/heads/main","pushedAt":"2023-11-12T12:36:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kalavattam","name":"Kris Alavattam","path":"/kalavattam","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34422552?s=80&v=4"},"commit":{"message":"Cleaning up a bit","shortMessageHtmlLink":"Cleaning up a bit"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNi0xMlQxNTo1Mjo0NC4wMDAwMDBazwAAAARjgUeQ","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNi0xMlQxNTo1Mjo0NC4wMDAwMDBazwAAAARjgUeQ","endCursor":"Y3Vyc29yOnYyOpK7MjAyMy0xMS0xMlQxMjozNjowOC4wMDAwMDBazwAAAAOtLrf2"}},"title":"Activity · kalavattam/2023_tutorial_ChIP-seq"}