{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":3416578,"defaultBranch":"main","name":"igv","ownerLogin":"igvteam","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2012-02-11T17:30:30.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/11527111?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1726507658.0","currentOid":""},"activityList":{"items":[{"before":"068e20a7a9df69bf31094364dfb61706fbe49079","after":"4448888c12c904e37620d1d41b936cde2722db70","ref":"refs/heads/main","pushedAt":"2024-09-20T17:56:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Update CRAM reference test to include a genbank (gbk) referece with chromosome aliasing","shortMessageHtmlLink":"Update CRAM reference test to include a genbank (gbk) referece with c…"}},{"before":"b16d2223f958866acc6b79d837bf8d94183edd3e","after":"35c92941648b6e887041e601dd450e2e2d5eee55","ref":"refs/heads/lb_exclude_snappy","pushedAt":"2024-09-17T22:13:07.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lbergelson","name":"Louis Bergelson","path":"/lbergelson","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4700332?s=80&v=4"},"commit":{"message":"Remove Snappy to avoid issues with notarization\n\n* update htsjd 4.1.1 -> 4.1.2 which makes Snappy optional","shortMessageHtmlLink":"Remove Snappy to avoid issues with notarization"}},{"before":"4171728ed2c81bc0f1c35aaa7c37ea23e327fd09","after":"e7a77f3f5b060e497df6ae3a2795e9fd1c13efbb","ref":"refs/heads/lb_fixup_info","pushedAt":"2024-09-16T20:59:45.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"lbergelson","name":"Louis Bergelson","path":"/lbergelson","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4700332?s=80&v=4"},"commit":{"message":"new editor","shortMessageHtmlLink":"new editor"}},{"before":"068e20a7a9df69bf31094364dfb61706fbe49079","after":"b16d2223f958866acc6b79d837bf8d94183edd3e","ref":"refs/heads/lb_exclude_snappy","pushedAt":"2024-09-16T17:27:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lbergelson","name":"Louis Bergelson","path":"/lbergelson","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4700332?s=80&v=4"},"commit":{"message":"Remove snappy","shortMessageHtmlLink":"Remove snappy"}},{"before":null,"after":"068e20a7a9df69bf31094364dfb61706fbe49079","ref":"refs/heads/lb_exclude_snappy","pushedAt":"2024-09-16T17:27:38.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"lbergelson","name":"Louis Bergelson","path":"/lbergelson","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4700332?s=80&v=4"},"commit":{"message":"Replace compiled shell script MacOS launcher","shortMessageHtmlLink":"Replace compiled shell script MacOS launcher"}},{"before":"445dd441ae23fccdc4b5a90853ebac103faf75c5","after":null,"ref":"refs/heads/launcher","pushedAt":"2024-09-16T05:41:52.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"}},{"before":"e16fd785a9231fa04b0a32c839612136870ccefa","after":"068e20a7a9df69bf31094364dfb61706fbe49079","ref":"refs/heads/main","pushedAt":"2024-09-16T05:41:45.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Replace compiled shell script MacOS launcher","shortMessageHtmlLink":"Replace compiled shell script MacOS launcher"}},{"before":null,"after":"445dd441ae23fccdc4b5a90853ebac103faf75c5","ref":"refs/heads/launcher","pushedAt":"2024-09-16T05:40:42.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Replace compiled shell script launcher with \"c\" program launcher","shortMessageHtmlLink":"Replace compiled shell script launcher with \"c\" program launcher"}},{"before":"bfd072fef49095a45c2bfd36c4f146f280e8035a","after":"e16fd785a9231fa04b0a32c839612136870ccefa","ref":"refs/heads/main","pushedAt":"2024-09-15T02:32:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Update mac startup script for jdk 21","shortMessageHtmlLink":"Update mac startup script for jdk 21"}},{"before":"e658784e7dd4516cc4493bb481e6cbc3a5fdaf6c","after":"bfd072fef49095a45c2bfd36c4f146f280e8035a","ref":"refs/heads/main","pushedAt":"2024-09-14T04:11:54.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Update jdk-17 references to jdk-21","shortMessageHtmlLink":"Update jdk-17 references to jdk-21"}},{"before":null,"after":"67b88b8e3569e97111bbf47dcd82f8315d437b34","ref":"refs/heads/lb_java_21","pushedAt":"2024-09-13T17:30:50.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"update github actions","shortMessageHtmlLink":"update github actions"}},{"before":"67b88b8e3569e97111bbf47dcd82f8315d437b34","after":null,"ref":"refs/heads/lb_java_21","pushedAt":"2024-09-13T17:25:01.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"}},{"before":"e8e38e1d288999472659eed5cefe67611ee4f1bc","after":"e658784e7dd4516cc4493bb481e6cbc3a5fdaf6c","ref":"refs/heads/main","pushedAt":"2024-09-13T17:24:58.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Update to Java 21 and gradle 8.10.1 (#1568)\n\n* Update to Java 21 and gradle 8.10.1\r\n\r\n* Move from Java 17 -> Java 21\r\n* Update from gradle 8.0.2 -> 8.10.1\r\n * Replace some deprecated gradle code with newer styles\r\n * Something changed in the module resolution with this update which caused us to not be able to\r\n resolve automatic modules.\r\n * Introduced a new gradle plugin which fixes the problem and removed the manual module\r\n path manipulation we were doing.\r\n\r\n* update github actions","shortMessageHtmlLink":"Update to Java 21 and gradle 8.10.1 (#1568)"}},{"before":"a7811c08973708875a28694c944fe1d645409d63","after":"67b88b8e3569e97111bbf47dcd82f8315d437b34","ref":"refs/heads/lb_java_21","pushedAt":"2024-09-12T17:43:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lbergelson","name":"Louis Bergelson","path":"/lbergelson","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4700332?s=80&v=4"},"commit":{"message":"update github actions","shortMessageHtmlLink":"update github actions"}},{"before":null,"after":"a7811c08973708875a28694c944fe1d645409d63","ref":"refs/heads/lb_java_21","pushedAt":"2024-09-12T17:12:37.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"lbergelson","name":"Louis Bergelson","path":"/lbergelson","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4700332?s=80&v=4"},"commit":{"message":"Update to Java 21 and gradle 8.10.1\n\n* Move from Java 17 -> Java 21\n* Update from gradle 8.0.2 -> 8.10.1\n * Replace some deprecated gradle code with newer styles\n * Something changed in the module resolution with this update which caused us to not be able to\n resolve automatic modules.\n * Introduced a new gradle plugin which fixes the problem and removed the manual module\n path manipulation we were doing.","shortMessageHtmlLink":"Update to Java 21 and gradle 8.10.1"}},{"before":null,"after":"6939fdb94e491d74e32f8088ce85a9cc5aa4a3f7","ref":"refs/heads/uncalled_4","pushedAt":"2024-09-10T23:24:19.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":".","shortMessageHtmlLink":"."}},{"before":"7f6ebe0735c5338a99517368e8be2e282ee5adec","after":null,"ref":"refs/heads/Genome_startup_refactor","pushedAt":"2024-09-10T23:23:29.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"}},{"before":"5a9c3ec689d94311666f7b3a26b192b5cc865b65","after":"e8e38e1d288999472659eed5cefe67611ee4f1bc","ref":"refs/heads/main","pushedAt":"2024-09-10T23:23:26.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Genome loading refactor to recover gracefully on startup errors (#1553)\n\n* Genome loading refactor to recover gracefully on startup errors related to genome load","shortMessageHtmlLink":"Genome loading refactor to recover gracefully on startup errors (#1553)"}},{"before":"25ae842d3b59b07028fa25c1a4338e3711f358cb","after":null,"ref":"refs/heads/basemod_colors","pushedAt":"2024-09-10T23:20:29.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"}},{"before":"97dd56db0c323096dff694369cbf1a0d3287a766","after":"5a9c3ec689d94311666f7b3a26b192b5cc865b65","ref":"refs/heads/main","pushedAt":"2024-09-10T23:20:27.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Add basemod colors for 3 chebi codes. See #1563 (#1566)","shortMessageHtmlLink":"Add basemod colors for 3 chebi codes. See #1563 (#1566)"}},{"before":"c2728ece48cfc04fb00f188235492fe1e6d9e1b6","after":null,"ref":"refs/heads/lb_improve_hide_small_indel","pushedAt":"2024-09-10T23:19:50.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"}},{"before":"5b18361f9240cae38121876a7be9e99b5089cf53","after":"97dd56db0c323096dff694369cbf1a0d3287a766","ref":"refs/heads/main","pushedAt":"2024-09-10T23:19:48.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Improve behavior of the Hide small indels menu option (#1564)\n\n* If you cancel the popup dialogue or enter an invalid value then no change will be made.\r\n Previously cancelling it produced a stacktrace in the log and toggled the state using the\r\n old value.","shortMessageHtmlLink":"Improve behavior of the Hide small indels menu option (#1564)"}},{"before":"2c1a2b371f941a8d5160a98a1328a96c67c2894e","after":"4171728ed2c81bc0f1c35aaa7c37ea23e327fd09","ref":"refs/heads/lb_fixup_info","pushedAt":"2024-09-10T21:37:46.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"lbergelson","name":"Louis Bergelson","path":"/lbergelson","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4700332?s=80&v=4"},"commit":{"message":"integrating pref","shortMessageHtmlLink":"integrating pref"}},{"before":null,"after":"25ae842d3b59b07028fa25c1a4338e3711f358cb","ref":"refs/heads/basemod_colors","pushedAt":"2024-09-10T17:35:39.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Add basemod colors for 3 chebi codes. See #1563","shortMessageHtmlLink":"Add basemod colors for 3 chebi codes. See #1563"}},{"before":"1975caa3d1de6bf9ba9d0e10db20221d68c32288","after":"49987531eea1e3a14c22e25443db893189cc5398","ref":"refs/heads/2.18.X","pushedAt":"2024-09-10T03:34:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"disable snappy 3","shortMessageHtmlLink":"disable snappy 3"}},{"before":"4521c92408bdc6c74276b861f9bc2c25ff2e5157","after":"5b18361f9240cae38121876a7be9e99b5089cf53","ref":"refs/heads/main","pushedAt":"2024-09-10T03:02:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"disable snappy 3","shortMessageHtmlLink":"disable snappy 3"}},{"before":"c265c9d4dcaaafce5fc3ab7208a148b41bd9aedc","after":"4521c92408bdc6c74276b861f9bc2c25ff2e5157","ref":"refs/heads/main","pushedAt":"2024-09-09T22:06:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"disable snappy, second attempt","shortMessageHtmlLink":"disable snappy, second attempt"}},{"before":"3240345937694b1bd1b4edab66443337df9493d5","after":"1975caa3d1de6bf9ba9d0e10db20221d68c32288","ref":"refs/heads/2.18.X","pushedAt":"2024-09-09T21:32:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Disable \"snappy\" for command line igvtools","shortMessageHtmlLink":"Disable \"snappy\" for command line igvtools"}},{"before":"ab89ab95ff04812fe0548d80fb65d4bdf1eadba9","after":"c265c9d4dcaaafce5fc3ab7208a148b41bd9aedc","ref":"refs/heads/main","pushedAt":"2024-09-09T21:32:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Disable \"snappy\" for command line igvtools","shortMessageHtmlLink":"Disable \"snappy\" for command line igvtools"}},{"before":"8e773c2ec3a22ff2ec7d4e165a836cb7a05453a0","after":"3240345937694b1bd1b4edab66443337df9493d5","ref":"refs/heads/2.18.X","pushedAt":"2024-09-09T20:02:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jrobinso","name":"Jim Robinson","path":"/jrobinso","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/933148?s=80&v=4"},"commit":{"message":"Remove \"snappy\" dependency","shortMessageHtmlLink":"Remove \"snappy\" dependency"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0yMFQxNzo1NjoxOS4wMDAwMDBazwAAAAS8PRkF","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0yMFQxNzo1NjoxOS4wMDAwMDBazwAAAAS8PRkF","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0wOVQyMDowMjozMC4wMDAwMDBazwAAAASxTw29"}},"title":"Activity · igvteam/igv"}