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Website: point to Owen's "mechanistic model" simulation #179

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gregorgorjanc opened this issue Feb 12, 2024 · 1 comment
Open

Website: point to Owen's "mechanistic model" simulation #179

gregorgorjanc opened this issue Feb 12, 2024 · 1 comment

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@gregorgorjanc
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Owen used AlphaSimR for "mechanistic" simulations. It would be neat to point to that simulation work in the forthcoming website.

@gregorgorjanc
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gregorgorjanc commented Feb 21, 2024

This is the paper:

Investigations into the emergent properties of gene-to-phenotype networks across cycles of selection: a case study of shoot branching in plants
https://academic.oup.com/insilicoplants/article/4/1/diac006/6577055

and here is the code

https://github.com/powellow/GeneticCanalizationOfG2PNetworks

There are outputs related to the above paper: https://doi.org/10.6084/m9.figshare.23590083.v1, as well as a simulated sorghum dataset (integrating APSIM and AlphSimR) for GxE prediction investigations: https://doi.org/10.6084/m9.figshare.23789685.v5

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