{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":13995531,"defaultBranch":"master","name":"tcoffee","ownerLogin":"cbcrg","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2013-10-30T18:23:12.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/4135672?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1726229571.0","currentOid":""},"activityList":{"items":[{"before":"114dbc014c44a95f5e3a6163eed0bc28aaccb02a","after":"aca0c75fbfd10a54be2ced4aeac360a2f838b1e2","ref":"refs/heads/master","pushedAt":"2024-09-13T14:15:14.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Merge pull request #68 from cbcrg/fixes\n\nUpdate ci ubuntu images","shortMessageHtmlLink":"Merge pull request #68 from cbcrg/fixes"}},{"before":null,"after":"94c3a342d3b09221c9f9cbf0d8623382f783966b","ref":"refs/heads/fixes","pushedAt":"2024-09-13T12:12:51.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Update ci ubuntu images","shortMessageHtmlLink":"Update ci ubuntu images"}},{"before":"b8b01e06b1d473ca330925707a840b3da88ed280","after":"114dbc014c44a95f5e3a6163eed0bc28aaccb02a","ref":"refs/heads/master","pushedAt":"2024-06-07T10:17:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"beta release - Version_13.46.1.b8b01e06","shortMessageHtmlLink":"beta release - Version_13.46.1.b8b01e06"}},{"before":"d94edda52827afa28f9fb05712769cc9d50ac484","after":"b8b01e06b1d473ca330925707a840b3da88ed280","ref":"refs/heads/master","pushedAt":"2024-06-06T08:54:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Get rid of python version tag","shortMessageHtmlLink":"Get rid of python version tag"}},{"before":"db9ab9dbb898e34db08502206f27cae26300547e","after":"d94edda52827afa28f9fb05712769cc9d50ac484","ref":"refs/heads/master","pushedAt":"2024-06-06T08:51:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Update readthedocs.yaml","shortMessageHtmlLink":"Update readthedocs.yaml"}},{"before":"a28d7799101120ff37bce099918c2f498566be2d","after":"db9ab9dbb898e34db08502206f27cae26300547e","ref":"refs/heads/master","pushedAt":"2024-06-06T08:50:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Enable installation of requirements by readthedocs","shortMessageHtmlLink":"Enable installation of requirements by readthedocs"}},{"before":"6adc7dcad8b45dc7331f54bf2a09bc8c75b0965a","after":"a28d7799101120ff37bce099918c2f498566be2d","ref":"refs/heads/master","pushedAt":"2024-06-06T08:46:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Update requirements","shortMessageHtmlLink":"Update requirements"}},{"before":"cb1f303403ffe0251f202fd9b4ee751a2a08d263","after":"6adc7dcad8b45dc7331f54bf2a09bc8c75b0965a","ref":"refs/heads/master","pushedAt":"2024-06-06T08:41:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Dashes or underscores?","shortMessageHtmlLink":"Dashes or underscores?"}},{"before":"43cd8eae87f470f0f14a041edee8096e14b89fd3","after":"cb1f303403ffe0251f202fd9b4ee751a2a08d263","ref":"refs/heads/master","pushedAt":"2024-06-06T08:38:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Update conf.py for readthedocs","shortMessageHtmlLink":"Update conf.py for readthedocs"}},{"before":"66e5f889cde53426e2d74f76973cc98bb49b843c","after":"43cd8eae87f470f0f14a041edee8096e14b89fd3","ref":"refs/heads/master","pushedAt":"2024-06-06T08:33:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Add sphinx_rtd_theme to requirements","shortMessageHtmlLink":"Add sphinx_rtd_theme to requirements"}},{"before":"f281121a6cf5037ea23866bcd32b344445e0acae","after":"66e5f889cde53426e2d74f76973cc98bb49b843c","ref":"refs/heads/master","pushedAt":"2024-06-06T08:25:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Add build os to readthedocs.yaml","shortMessageHtmlLink":"Add build os to readthedocs.yaml"}},{"before":"927f6a330afb693e2d78fcac0d153ad460fabffd","after":"f281121a6cf5037ea23866bcd32b344445e0acae","ref":"refs/heads/master","pushedAt":"2024-06-06T08:17:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Add minimal readthedocs file","shortMessageHtmlLink":"Add minimal readthedocs file"}},{"before":"e5a71939c29bc14091f22568fee2d52e03e7de0c","after":"927f6a330afb693e2d78fcac0d153ad460fabffd","ref":"refs/heads/master","pushedAt":"2024-06-05T20:07:56.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Merge branch 'master' of https://github.com/cbcrg/tcoffee","shortMessageHtmlLink":"Merge branch 'master' of https://github.com/cbcrg/tcoffee"}},{"before":"dbca9bc28ee8cc0e056e3c4f7ad52f292b2d6131","after":"aba78af93a9fa2f7d17e7bd826705ae86a68ad72","ref":"refs/heads/dev","pushedAt":"2024-03-26T09:03:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"fixed the tutorials, forced tc_generic to fkush out remote blast issues","shortMessageHtmlLink":"fixed the tutorials, forced tc_generic to fkush out remote blast issues"}},{"before":"8448c15f0c0277cdc0aefa111b6c7e4af93c765f","after":"e5a71939c29bc14091f22568fee2d52e03e7de0c","ref":"refs/heads/master","pushedAt":"2024-03-25T10:09:20.000Z","pushType":"pr_merge","commitsCount":7,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"Merge pull request #63 from cbcrg/dev\n\nAdded multistrap and fixed the ncbiiblast.pl client issue with EBI - impacts psicoffee and expresso","shortMessageHtmlLink":"Merge pull request #63 from cbcrg/dev"}},{"before":"4bbdff8e07a0fe79eb83a4259180ca93793ceffa","after":"dbca9bc28ee8cc0e056e3c4f7ad52f292b2d6131","ref":"refs/heads/dev","pushedAt":"2024-03-25T09:40:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"added ncbiblast.pl file","shortMessageHtmlLink":"added ncbiblast.pl file"}},{"before":"f92aff617307b02b07651ee82c423c507bf3b148","after":"4bbdff8e07a0fe79eb83a4259180ca93793ceffa","ref":"refs/heads/dev","pushedAt":"2024-03-25T09:32:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"fixed the ncbi webservice client. Now using: ncbiblast.pl, user must install Mozilla::CA","shortMessageHtmlLink":"fixed the ncbi webservice client. Now using: ncbiblast.pl, user must …"}},{"before":"ce9883997d410b0840ea4c4d133762a6c63a91bd","after":"f92aff617307b02b07651ee82c423c507bf3b148","ref":"refs/heads/dev","pushedAt":"2024-03-24T15:27:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"finished multistrap, phylo3d, added documentation and tutorials","shortMessageHtmlLink":"finished multistrap, phylo3d, added documentation and tutorials"}},{"before":"d76d31b49aa0c171eb1364046e61e1d5069bb850","after":"ce9883997d410b0840ea4c4d133762a6c63a91bd","ref":"refs/heads/dev","pushedAt":"2024-03-23T16:07:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"fixed the phylo3d_bm bug. An ML split near the root was omitted","shortMessageHtmlLink":"fixed the phylo3d_bm bug. An ML split near the root was omitted"}},{"before":"5fdc5ff87081766e14a4b834e1e7e5010bc1254c","after":"d76d31b49aa0c171eb1364046e61e1d5069bb850","ref":"refs/heads/dev","pushedAt":"2024-03-23T10:40:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"fixed bug in phylo3d_bm - exclusion of dataset with all branches PP","shortMessageHtmlLink":"fixed bug in phylo3d_bm - exclusion of dataset with all branches PP"}},{"before":"b4f57e36ae2db470d5f9c6a71ecb057530c3942f","after":"5fdc5ff87081766e14a4b834e1e7e5010bc1254c","ref":"refs/heads/dev","pushedAt":"2024-03-23T00:29:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"fixed a bug in phyho3d_bm: discrepency in naming of bs combo modes","shortMessageHtmlLink":"fixed a bug in phyho3d_bm: discrepency in naming of bs combo modes"}},{"before":"e562d1f1479c3368fc7f755756cc4f03111539d9","after":"8448c15f0c0277cdc0aefa111b6c7e4af93c765f","ref":"refs/heads/master","pushedAt":"2024-03-22T11:59:05.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Merge pull request #62 from cbcrg/dev\n\nfixed pdb name parsing in case _ in tc_generic_method.pl","shortMessageHtmlLink":"Merge pull request #62 from cbcrg/dev"}},{"before":"c263506a64260b7fe25fced2b1341da263b90e4e","after":"b4f57e36ae2db470d5f9c6a71ecb057530c3942f","ref":"refs/heads/dev","pushedAt":"2024-03-22T11:41:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"fixed pdb name parsing in case _ in tc_generic_method.pl","shortMessageHtmlLink":"fixed pdb name parsing in case <pdbid>_<smg> in tc_generic_method.pl"}},{"before":"65ed36bf915c4f88171578391deecaade5baf4cd","after":"e562d1f1479c3368fc7f755756cc4f03111539d9","ref":"refs/heads/master","pushedAt":"2024-03-22T10:25:18.000Z","pushType":"pr_merge","commitsCount":30,"pusher":{"login":"JoseEspinosa","name":"Jose Espinosa-Carrasco","path":"/JoseEspinosa","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/6224346?s=80&v=4"},"commit":{"message":"Merge pull request #61 from cbcrg/dev\n\nDev","shortMessageHtmlLink":"Merge pull request #61 from cbcrg/dev"}},{"before":"c34b7d24671a5322adf0ac8d23454bc618577a9f","after":"c263506a64260b7fe25fced2b1341da263b90e4e","ref":"refs/heads/dev","pushedAt":"2024-03-22T09:51:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"fix dirichelet 4 - simplified sin_pi","shortMessageHtmlLink":"fix dirichelet 4 - simplified sin_pi"}},{"before":"21c128d3a60c183fa5fda5a00f1ecc30e4c71da3","after":"c34b7d24671a5322adf0ac8d23454bc618577a9f","ref":"refs/heads/dev","pushedAt":"2024-03-22T09:37:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"fix dirichelet 3","shortMessageHtmlLink":"fix dirichelet 3"}},{"before":"a28971496867a8686b2cc079214b33e14d1d1ce9","after":"21c128d3a60c183fa5fda5a00f1ecc30e4c71da3","ref":"refs/heads/dev","pushedAt":"2024-03-22T09:19:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"fix dirichelet 2","shortMessageHtmlLink":"fix dirichelet 2"}},{"before":"2aff432729b745e3b996a88e925fc320fb9f21a7","after":"a28971496867a8686b2cc079214b33e14d1d1ce9","ref":"refs/heads/dev","pushedAt":"2024-03-22T09:07:42.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"include stdint.h in dirichlet","shortMessageHtmlLink":"include stdint.h in dirichlet"}},{"before":"8039a0707bcf12cc3d1f50970836d738703ae20a","after":"2aff432729b745e3b996a88e925fc320fb9f21a7","ref":"refs/heads/dev","pushedAt":"2024-03-22T08:52:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"added cstdint lib for dirichlet computation","shortMessageHtmlLink":"added cstdint lib for dirichlet computation"}},{"before":"05c5d87499bffbac011c95757e551f159d55c02f","after":"8039a0707bcf12cc3d1f50970836d738703ae20a","ref":"refs/heads/dev","pushedAt":"2024-03-20T20:38:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cnotred","name":"Cedric Notredame","path":"/cnotred","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5815721?s=80&v=4"},"commit":{"message":"added multistrap","shortMessageHtmlLink":"added multistrap"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0xM1QxNDoxNToxNC4wMDAwMDBazwAAAAS1kNBH","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0xM1QxNDoxNToxNC4wMDAwMDBazwAAAAS1kNBH","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wMy0yMFQyMDozODoxOC4wMDAwMDBazwAAAAQbFvyW"}},"title":"Activity · cbcrg/tcoffee"}