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query for genes having a GO term or children #72

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andrewsu opened this issue Sep 16, 2019 · 1 comment

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andrewsu commented Sep 16, 2019

I can query for genes with an explicit annotation for a GO term, e.g., http://mygene.info/v3/query?q=GO:0061702

However, GO:0061702 has four children -- GO:0097169, GO:0072557, GO:0072558, and GO:0072559.

Is there an easy way (or should we create an easy way) to query for genes with both explicit AND inferred GO terms?

The text was updated successfully, but these errors were encountered:

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newgene commented Sep 18, 2019

One way doing this is to use EBI's OLS API to get the children GO IDs and then query MyGene.info API:

https://www.ebi.ac.uk/ols/docs/api

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