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dbotus breaks if you aren't in the same folder as the fastq file #41

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spacocha opened this issue Sep 17, 2014 · 0 comments
Open

dbotus breaks if you aren't in the same folder as the fastq file #41

spacocha opened this issue Sep 17, 2014 · 0 comments
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@spacocha
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I wrote the code so that the output of mothur has the same path as the fastq but when it tries to import the output of mothur it looks for the file name in the current directory. This needs to be changed for that and all following steps I think in dbotucaller

@spacocha spacocha added the bug label Sep 17, 2014
@spacocha spacocha self-assigned this Sep 17, 2014
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