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PRISM secondary screen? #86

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mschubert opened this issue Apr 24, 2023 · 1 comment
Open

PRISM secondary screen? #86

mschubert opened this issue Apr 24, 2023 · 1 comment

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@mschubert
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According to the DepMap PRISM repurposing page:

The primary PRISM Repurposing dataset contains the results of pooled-cell line chemical-perturbation viability screens for 4,518 compounds screened against 578 or 562 cell lines.

The secondary PRISM Repurposing dataset contains the results of pooled-cell line chemical-perturbation viability screens for 1,448 compounds screened against 499 cell lines in a 8-step, 4-fold dilution, starting from 10μM.

However, when I look at the drug sensitivity function, it only mentions the primary screen.

Is there a reason the secondary screen is not included in this package?

@lgatto
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lgatto commented Apr 25, 2023

@tfkillian should be able to help here.

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