From b12c65ee0ef820a7b598c967bf2c75d29c50e125 Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Thu, 15 Jun 2023 13:22:33 +0100 Subject: [PATCH] Update manifest files (#389) Co-authored-by: yebai --- tutorials/00-introduction/Manifest.toml | 357 +++++++----- .../01-gaussian-mixture-model/Manifest.toml | 364 +++++++----- .../02-logistic-regression/Manifest.toml | 374 +++++++----- .../03-bayesian-neural-network/Manifest.toml | 401 +++++++------ .../04-hidden-markov-model/Manifest.toml | 384 +++++++------ tutorials/05-linear-regression/Manifest.toml | 397 +++++++------ .../06-infinite-mixture-model/Manifest.toml | 360 ++++++------ tutorials/07-poisson-regression/Manifest.toml | 374 +++++++----- .../Manifest.toml | 374 ++++++------ .../09-variational-inference/Manifest.toml | 500 +++++++++------- .../Manifest.toml | 533 +++++++++--------- tutorials/11-probabilistic-pca/Manifest.toml | 356 +++++++----- tutorials/12-gaussian-process/Manifest.toml | 383 ++++++++----- .../13-seasonal-time-series/Manifest.toml | 358 +++++++----- tutorials/14-minituring/Manifest.toml | 214 ++++--- .../docs-00-getting-started/Manifest.toml | 384 +++++++------ 16 files changed, 3508 insertions(+), 2605 deletions(-) diff --git a/tutorials/00-introduction/Manifest.toml b/tutorials/00-introduction/Manifest.toml index a51d27f01..55382ab37 100644 --- a/tutorials/00-introduction/Manifest.toml +++ b/tutorials/00-introduction/Manifest.toml @@ -25,9 +25,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -74,10 +74,10 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[ArrayInterfaceCore]] deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] @@ -94,6 +94,12 @@ version = "0.1.4" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -107,10 +113,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -126,12 +132,22 @@ git-tree-sha1 = "1234b03e94938e6f2b14834dfd3ef45698d5e14f" uuid = "76274a88-744f-5084-9051-94815aaf08c4" version = "0.10.8" +[[BitFlags]] +git-tree-sha1 = "43b1a4a8f797c1cddadf60499a8a077d4af2cd2d" +uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" +version = "0.1.7" + [[Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" @@ -146,21 +162,21 @@ version = "0.5.1" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] @@ -168,11 +184,17 @@ git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" version = "0.14.4" +[[CodecZlib]] +deps = ["TranscodingStreams", "Zlib_jll"] +git-tree-sha1 = "9c209fb7536406834aa938fb149964b985de6c83" +uuid = "944b1d66-785c-5afd-91f1-9de20f533193" +version = "0.7.1" + [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -198,9 +220,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -219,9 +241,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -231,9 +259,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -246,9 +274,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -294,9 +322,9 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -309,16 +337,16 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -390,9 +418,9 @@ version = "3.3.10+0" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "deed294cde3de20ae0b2e0355a6c4e1c6a5ceffc" +git-tree-sha1 = "7072f1e3e5a8be51d525d64f63d3ec1287ff2790" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.12.8" +version = "0.13.11" [[FixedPointNumbers]] deps = ["Statistics"] @@ -459,21 +487,21 @@ version = "3.3.8+0" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -499,10 +527,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"] -git-tree-sha1 = "c7ec02c4c6a039a98a15f955462cd7aea5df4508" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "0.8.19" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -511,21 +539,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -540,9 +563,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -562,9 +585,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -600,9 +623,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -610,11 +633,17 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -628,10 +657,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -646,9 +687,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -745,9 +786,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -789,9 +830,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -831,28 +872,27 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] -deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsBase"] +git-tree-sha1 = "6d019f5a0465522bbfdd68ecfad7f86b535d6935" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.9.0" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] -deps = ["OpenLibm_jll"] -git-tree-sha1 = "0877504529a3e5c3343c6f8b4c0381e57e4387e4" +git-tree-sha1 = "b086b7ea07f8e38cf122f5016af580881ac914fe" uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3" -version = "1.0.2" +version = "0.3.7" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -893,11 +933,17 @@ uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" +[[OpenSSL]] +deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" +uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" +version = "1.4.1" + [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -905,12 +951,6 @@ git-tree-sha1 = "13652491f6856acfd2db29360e1bbcd4565d04f1" uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e" version = "0.5.5+0" -[[Optimisers]] -deps = ["ChainRulesCore", "Functors", "LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "e5a1825d3d53aa4ad4fb42bd4927011ad4a78c3d" -uuid = "3bd65402-5787-11e9-1adc-39752487f4e2" -version = "0.2.15" - [[Opus_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "51a08fb14ec28da2ec7a927c4337e4332c2a4720" @@ -918,9 +958,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -933,10 +973,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -960,28 +1000,34 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" + +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1026,9 +1072,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1037,16 +1083,16 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] @@ -1085,15 +1131,15 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" @@ -1117,9 +1163,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1140,6 +1186,11 @@ git-tree-sha1 = "91eddf657aca81df9ae6ceb20b959ae5653ad1de" uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f" version = "1.0.3" +[[SimpleBufferStream]] +git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" +uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" +version = "1.1.0" + [[SnoopPrecompile]] deps = ["Preferences"] git-tree-sha1 = "e760a70afdcd461cf01a575947738d359234665c" @@ -1173,9 +1224,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1194,9 +1245,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1211,10 +1262,10 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "2b35ba790f1f823872dcf378a6d3c3b520092eac" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.1" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1265,25 +1316,31 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[Tracker]] -deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +deps = ["Adapt", "DiffRules", "ForwardDiff", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] +git-tree-sha1 = "0874c1b5de1b5529b776cfeca3ec0acfada97b1b" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.20" + +[[TranscodingStreams]] +deps = ["Random", "Test"] +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" +uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Turing]] deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "Setfield", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker"] @@ -1291,6 +1348,11 @@ git-tree-sha1 = "8a40377bcc4b054ebdc8f680e96cd73a4a6fe2e6" uuid = "fce5fe82-541a-59a6-adf8-730c64b5f9a0" version = "0.22.0" +[[URIs]] +git-tree-sha1 = "074f993b0ca030848b897beff716d93aca60f06a" +uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" +version = "1.4.2" + [[UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" @@ -1309,6 +1371,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1482,9 +1567,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/01-gaussian-mixture-model/Manifest.toml b/tutorials/01-gaussian-mixture-model/Manifest.toml index 9b06ca6c8..469c8d337 100644 --- a/tutorials/01-gaussian-mixture-model/Manifest.toml +++ b/tutorials/01-gaussian-mixture-model/Manifest.toml @@ -1,5 +1,10 @@ # This file is machine-generated - editing it directly is not advised +[[ADTypes]] +git-tree-sha1 = "dcfdf328328f2645531c4ddebf841228aef74130" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.3" + [[AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" @@ -25,9 +30,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -74,14 +79,20 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -95,10 +106,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -125,6 +136,11 @@ git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" @@ -139,27 +155,27 @@ version = "0.5.1" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -168,10 +184,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -197,9 +213,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -218,9 +234,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -230,9 +252,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -245,9 +267,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -260,12 +282,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -293,31 +309,31 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] -deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "49eba9ad9f7ead780bfb7ee319f962c811c6d3b2" +deps = ["LinearAlgebra", "Statistics"] +git-tree-sha1 = "a5b88815e6984e9f3256b6ca0dc63109b16a506f" uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" -version = "0.10.8" +version = "0.9.2" [[Distributed]] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -389,9 +405,9 @@ version = "3.3.10+0" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "589d3d3bff204bdd80ecc53293896b4f39175723" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "1.1.1" [[FixedPointNumbers]] deps = ["Statistics"] @@ -458,21 +474,21 @@ version = "3.3.8+0" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -498,10 +514,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "CodecZlib", "Dates", "IniFile", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "37e4657cd56b11abe3d10cd4a1ec5fbdb4180263" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.7.4" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -510,21 +526,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -539,9 +550,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -561,9 +572,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -599,9 +610,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -609,11 +620,17 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -627,10 +644,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -645,9 +674,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[Lazy]] deps = ["MacroTools"] @@ -750,9 +779,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -794,9 +823,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -837,15 +866,15 @@ uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -855,9 +884,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -900,15 +929,15 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "6503b77492fd7fcb9379bf73cd31035670e3c509" +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.3.3" +version = "1.4.1" [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -929,9 +958,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -944,10 +973,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -971,28 +1000,34 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" + +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1037,9 +1072,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1048,22 +1083,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.38.5" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1096,30 +1131,30 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "ddf57a23d610d30d0c4bd01132f4646a2a77d171" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" +version = "1.92.5" [[SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "0.2.12" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1134,9 +1169,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1162,12 +1197,6 @@ git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" version = "1.1.0" -[[SnoopPrecompile]] -deps = ["Preferences"] -git-tree-sha1 = "e760a70afdcd461cf01a575947738d359234665c" -uuid = "66db9d55-30c0-4569-8b51-7e840670fc0c" -version = "1.0.3" - [[Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1195,9 +1224,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1216,9 +1245,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1233,10 +1262,10 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1293,9 +1322,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1303,26 +1332,26 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" +version = "0.1.7" [[TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] @@ -1359,6 +1388,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1532,9 +1584,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/02-logistic-regression/Manifest.toml b/tutorials/02-logistic-regression/Manifest.toml index a3abcbe04..e6afb1e6f 100644 --- a/tutorials/02-logistic-regression/Manifest.toml +++ b/tutorials/02-logistic-regression/Manifest.toml @@ -25,9 +25,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -74,10 +74,10 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[ArrayInterfaceCore]] deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] @@ -94,6 +94,12 @@ version = "0.1.4" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -107,10 +113,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -126,17 +132,27 @@ git-tree-sha1 = "1234b03e94938e6f2b14834dfd3ef45698d5e14f" uuid = "76274a88-744f-5084-9051-94815aaf08c4" version = "0.10.8" +[[BitFlags]] +git-tree-sha1 = "43b1a4a8f797c1cddadf60499a8a077d4af2cd2d" +uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" +version = "0.1.7" + [[Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[CSV]] -deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "SnoopPrecompile", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] -git-tree-sha1 = "c700cce799b51c9045473de751e9319bdd1c6e94" +deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "PrecompileTools", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] +git-tree-sha1 = "44dbf560808d49041989b8a96cae4cffbeb7966a" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.10.9" +version = "0.10.11" [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -152,33 +168,33 @@ version = "0.5.1" [[CategoricalArrays]] deps = ["DataAPI", "Future", "Missings", "Printf", "Requires", "Statistics", "Unicode"] -git-tree-sha1 = "5084cc1a28976dd1642c9f337b28a3cb03e0f7d2" +git-tree-sha1 = "1568b28f91293458345dabba6a5ea3f183250a61" uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597" -version = "0.10.7" +version = "0.10.8" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -187,10 +203,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -216,9 +232,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -237,9 +253,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -249,9 +271,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -264,9 +286,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataFrames]] deps = ["Compat", "DataAPI", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] @@ -285,12 +307,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -318,9 +334,9 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -333,16 +349,16 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -414,9 +430,9 @@ version = "3.3.10+0" [[FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "7be5f99f7d15578798f338f5433b6c432ea8037b" +git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.0" +version = "1.16.1" [[FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -426,9 +442,9 @@ version = "0.9.20" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "deed294cde3de20ae0b2e0355a6c4e1c6a5ceffc" +git-tree-sha1 = "7072f1e3e5a8be51d525d64f63d3ec1287ff2790" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.12.8" +version = "0.13.11" [[FixedPointNumbers]] deps = ["Statistics"] @@ -495,27 +511,27 @@ version = "3.3.8+0" [[GLM]] deps = ["Distributions", "LinearAlgebra", "Printf", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "StatsModels"] -git-tree-sha1 = "cd3e314957dc11c4c905d54d1f5a65c979e4748a" +git-tree-sha1 = "97829cfda0df99ddaeaafb5b370d6cab87b7013e" uuid = "38e38edf-8417-5370-95a0-9cbb8c7f171a" -version = "1.8.2" +version = "1.8.3" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -541,10 +557,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"] -git-tree-sha1 = "c7ec02c4c6a039a98a15f955462cd7aea5df4508" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "0.8.19" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -553,21 +569,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -588,9 +599,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -610,9 +621,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -648,9 +659,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -658,11 +669,17 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -676,10 +693,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -694,9 +723,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -799,9 +828,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -861,9 +890,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -901,24 +930,24 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[Mocking]] deps = ["Compat", "ExprTools"] -git-tree-sha1 = "782e258e80d68a73d8c916e55f8ced1de00c2cea" +git-tree-sha1 = "4cc0c5a83933648b615c36c2b956d94fda70641e" uuid = "78c3b35d-d492-501b-9361-3d52fe80e533" -version = "0.7.6" +version = "0.7.7" [[MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -928,9 +957,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -971,11 +1000,17 @@ uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" +[[OpenSSL]] +deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" +uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" +version = "1.4.1" + [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -996,9 +1031,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1011,10 +1046,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1038,16 +1073,16 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" [[PooledArrays]] deps = ["DataAPI", "Future"] @@ -1055,17 +1090,23 @@ git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" version = "1.4.2" +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" + [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1122,9 +1163,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1133,16 +1174,16 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] @@ -1181,15 +1222,15 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" @@ -1213,9 +1254,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1241,6 +1282,11 @@ git-tree-sha1 = "91eddf657aca81df9ae6ceb20b959ae5653ad1de" uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f" version = "1.0.3" +[[SimpleBufferStream]] +git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" +uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" +version = "1.1.0" + [[SnoopPrecompile]] deps = ["Preferences"] git-tree-sha1 = "e760a70afdcd461cf01a575947738d359234665c" @@ -1274,9 +1320,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1295,9 +1341,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1313,15 +1359,15 @@ version = "1.3.0" [[StatsModels]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Printf", "REPL", "ShiftedArrays", "SparseArrays", "StatsBase", "StatsFuns", "Tables"] -git-tree-sha1 = "06a230063087c11910e9bbd17ccbf5af792a27a4" +git-tree-sha1 = "8cc7a5385ecaa420f0b3426f9b0135d0df0638ed" uuid = "3eaba693-59b7-5ba5-a881-562e759f1c8d" -version = "0.7.0" +version = "0.7.2" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1372,9 +1418,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1382,27 +1428,27 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[TimeZones]] deps = ["Dates", "Downloads", "InlineStrings", "LazyArtifacts", "Mocking", "Printf", "RecipesBase", "Scratch", "Unicode"] -git-tree-sha1 = "a92ec4466fc6e3dd704e2668b5e7f24add36d242" +git-tree-sha1 = "cdaa0c2a4449724aded839550eca7d7240bb6938" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "1.9.1" +version = "1.10.0" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Turing]] deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "Setfield", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker"] @@ -1410,6 +1456,11 @@ git-tree-sha1 = "8a40377bcc4b054ebdc8f680e96cd73a4a6fe2e6" uuid = "fce5fe82-541a-59a6-adf8-730c64b5f9a0" version = "0.22.0" +[[URIs]] +git-tree-sha1 = "074f993b0ca030848b897beff716d93aca60f06a" +uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" +version = "1.4.2" + [[UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" @@ -1428,6 +1479,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1612,9 +1686,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/03-bayesian-neural-network/Manifest.toml b/tutorials/03-bayesian-neural-network/Manifest.toml index 561cc5447..a80421777 100644 --- a/tutorials/03-bayesian-neural-network/Manifest.toml +++ b/tutorials/03-bayesian-neural-network/Manifest.toml @@ -1,5 +1,10 @@ # This file is machine-generated - editing it directly is not advised +[[ADTypes]] +git-tree-sha1 = "dcfdf328328f2645531c4ddebf841228aef74130" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.3" + [[AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" @@ -24,16 +29,16 @@ uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" version = "0.4.4" [[Accessors]] -deps = ["Compat", "CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Requires", "StaticArrays", "Test"] -git-tree-sha1 = "beabc31fa319f9de4d16372bff31b4801e43d32c" +deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Requires", "Test"] +git-tree-sha1 = "954634616d5846d8e216df1298be2298d55280b2" uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.28" +version = "0.1.32" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -68,10 +73,10 @@ version = "2.3.0" uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -101,10 +106,10 @@ uuid = "ab4f0b2a-ad5b-11e8-123f-65d77653426b" version = "0.4.2" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -120,6 +125,11 @@ git-tree-sha1 = "1234b03e94938e6f2b14834dfd3ef45698d5e14f" uuid = "76274a88-744f-5084-9051-94815aaf08c4" version = "0.10.8" +[[BitFlags]] +git-tree-sha1 = "43b1a4a8f797c1cddadf60499a8a077d4af2cd2d" +uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" +version = "0.1.7" + [[Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" @@ -133,27 +143,27 @@ version = "0.4.2" [[CUDA]] deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "CompilerSupportLibraries_jll", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Preferences", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "2dbdec5c010bed6c6b1e0e5fd213bfe47925abc3" +git-tree-sha1 = "442d989978ed3ff4e174c928ee879dc09d1ef693" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "4.1.0" +version = "4.3.2" [[CUDA_Driver_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "a1efe2bfb96c10906dede10f1580aca0ae6d092f" +git-tree-sha1 = "498f45593f6ddc0adff64a9310bb6710e851781b" uuid = "4ee394cb-3365-5eb0-8335-949819d2adfc" -version = "0.4.0+2" +version = "0.5.0+1" [[CUDA_Runtime_Discovery]] deps = ["Libdl"] -git-tree-sha1 = "58dd8ec29f54f08c04b052d2c2fa6760b4f4b3a4" +git-tree-sha1 = "bcc4a23cbbd99c8535a5318455dcf0f2546ec536" uuid = "1af6417a-86b4-443c-805f-a4643ffb695f" -version = "0.1.1" +version = "0.2.2" [[CUDA_Runtime_jll]] deps = ["Artifacts", "CUDA_Driver_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "96e06a24c89a9945c57278fd09fb717f71476d87" +git-tree-sha1 = "5248d9c45712e51e27ba9b30eebec65658c6ce29" uuid = "76a88914-d11a-5bdc-97e0-2f5a05c973a2" -version = "0.4.0+2" +version = "0.6.0+0" [[CUDNN_jll]] deps = ["Artifacts", "CUDA_Runtime_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] @@ -175,27 +185,33 @@ version = "0.5.1" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" + +[[CodecZlib]] +deps = ["TranscodingStreams", "Zlib_jll"] +git-tree-sha1 = "9c209fb7536406834aa938fb149964b985de6c83" +uuid = "944b1d66-785c-5afd-91f1-9de20f533193" +version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -221,9 +237,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -242,9 +258,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -254,9 +276,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[ContextVariablesX]] deps = ["Compat", "Logging", "UUIDs"] @@ -275,9 +297,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -317,25 +339,25 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distributed]] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -419,9 +441,9 @@ version = "0.1.1" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "589d3d3bff204bdd80ecc53293896b4f39175723" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "1.1.1" [[FixedPointNumbers]] deps = ["Statistics"] @@ -430,10 +452,10 @@ uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93" version = "0.8.4" [[Flux]] -deps = ["Adapt", "CUDA", "ChainRulesCore", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "NNlibCUDA", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "Zygote", "cuDNN"] -git-tree-sha1 = "e657a9aad824de4211606f113edd0b50d5e1f6db" +deps = ["Adapt", "CUDA", "ChainRulesCore", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "NNlibCUDA", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote", "cuDNN"] +git-tree-sha1 = "64005071944bae14fc145661f617eb68b339189c" uuid = "587475ba-b771-5e3f-ad9e-33799f191a9c" -version = "0.13.14" +version = "0.13.16" [[FoldsThreads]] deps = ["Accessors", "FunctionWrappers", "InitialValues", "SplittablesBase", "Transducers"] @@ -500,33 +522,33 @@ version = "3.3.8+0" [[GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] -git-tree-sha1 = "7a2e790b1e2e6f648cfb25c4500c5de1f7b375ef" +git-tree-sha1 = "a3351bc577a6b49297248aadc23a4add1097c2ac" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "8.6.5" +version = "8.7.1" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GPUCompiler]] -deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "TimerOutputs", "UUIDs"] -git-tree-sha1 = "fd6431121f31fed05a5386ac88b9bb3f97fdfa69" +deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "Scratch", "TimerOutputs", "UUIDs"] +git-tree-sha1 = "cb090aea21c6ca78d59672a7e7d13bd56d09de64" uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" -version = "0.18.0" +version = "0.20.3" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -552,10 +574,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"] -git-tree-sha1 = "c7ec02c4c6a039a98a15f955462cd7aea5df4508" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "0.8.19" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -564,21 +586,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -593,9 +610,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -615,9 +632,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -653,9 +670,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -670,16 +687,16 @@ uuid = "b14d175d-62b4-44ba-8fb7-3064adc8c3ec" version = "0.2.4" [[KernelAbstractions]] -deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "SnoopPrecompile", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "17d0bb94eef881b09c57967be12cca70fefb3304" +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.0" +version = "0.9.4" [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -695,20 +712,20 @@ version = "3.0.0+1" [[LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] -git-tree-sha1 = "f044a2796a9e18e0531b9b3072b0019a61f264bc" +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "4.17.1" +version = "5.2.0" [[LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "070e4b5b65827f82c16ae0916376cb47377aa1b5" +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.18+0" +version = "0.0.22+0" [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -723,9 +740,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[Lazy]] deps = ["MacroTools"] @@ -828,9 +845,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -872,9 +889,9 @@ version = "0.4.17" [[MLUtils]] deps = ["ChainRulesCore", "Compat", "DataAPI", "DelimitedFiles", "FLoops", "FoldsThreads", "NNlib", "Random", "ShowCases", "SimpleTraits", "Statistics", "StatsBase", "Tables", "Transducers"] -git-tree-sha1 = "f69cdbb5b7c630c02481d81d50eac43697084fe0" +git-tree-sha1 = "ca31739905ddb08c59758726e22b9e25d0d1521b" uuid = "f1d291b0-491e-4a28-83b9-f70985020b54" -version = "0.4.1" +version = "0.4.2" [[MacroTools]] deps = ["Markdown", "Random"] @@ -883,9 +900,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -925,10 +942,10 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NNlibCUDA]] deps = ["Adapt", "CUDA", "LinearAlgebra", "NNlib", "Random", "Statistics", "cuDNN"] @@ -950,9 +967,9 @@ version = "0.1.5" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -984,11 +1001,17 @@ version = "0.2.3" deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" +[[OpenSSL]] +deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" +uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" +version = "1.4.1" + [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1009,9 +1032,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1024,10 +1047,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1051,22 +1074,28 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" + +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyPrint]] git-tree-sha1 = "632eb4abab3449ab30c5e1afaa874f0b98b586e4" @@ -1075,9 +1104,9 @@ version = "0.2.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1117,9 +1146,9 @@ uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[Random123]] deps = ["Random", "RandomNumbers"] -git-tree-sha1 = "7a1a306b72cfa60634f03a911405f4e64d1b718b" +git-tree-sha1 = "552f30e847641591ba3f39fd1bed559b9deb0ef3" uuid = "74087812-796a-5b5d-8853-05524746bad3" -version = "1.6.0" +version = "1.6.1" [[RandomNumbers]] deps = ["Random", "Requires"] @@ -1134,9 +1163,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1145,22 +1174,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.38.5" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1181,9 +1210,9 @@ version = "1.3.0" [[ReverseDiff]] deps = ["ChainRulesCore", "DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] -git-tree-sha1 = "afc870db2b2c2df1ba3f7b199278bb071e4f6f90" +git-tree-sha1 = "5fb7c1053046a80b53cf9c0ef8526ea656de7b8c" uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" -version = "1.14.4" +version = "1.14.6" [[Rmath]] deps = ["Random", "Rmath_jll"] @@ -1199,30 +1228,30 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "ddf57a23d610d30d0c4bd01132f4646a2a77d171" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" +version = "1.92.5" [[SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "0.2.12" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1259,18 +1288,17 @@ git-tree-sha1 = "91eddf657aca81df9ae6ceb20b959ae5653ad1de" uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f" version = "1.0.3" +[[SimpleBufferStream]] +git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" +uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" +version = "1.1.0" + [[SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d" version = "0.9.4" -[[SnoopPrecompile]] -deps = ["Preferences"] -git-tree-sha1 = "e760a70afdcd461cf01a575947738d359234665c" -uuid = "66db9d55-30c0-4569-8b51-7e840670fc0c" -version = "1.0.3" - [[Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1298,9 +1326,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1319,9 +1347,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1384,9 +1412,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1394,26 +1422,32 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[TimerOutputs]] deps = ["ExprTools", "Printf"] -git-tree-sha1 = "f2fd3f288dfc6f507b0c3a2eb3bac009251e548b" +git-tree-sha1 = "f548a9e9c490030e545f72074a41edfd0e5bcdd7" uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" -version = "0.5.22" +version = "0.5.23" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" + +[[TranscodingStreams]] +deps = ["Random", "Test"] +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" +uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" +version = "0.1.7" [[TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] @@ -1427,6 +1461,11 @@ git-tree-sha1 = "8a40377bcc4b054ebdc8f680e96cd73a4a6fe2e6" uuid = "fce5fe82-541a-59a6-adf8-730c64b5f9a0" version = "0.22.0" +[[URIs]] +git-tree-sha1 = "074f993b0ca030848b897beff716d93aca60f06a" +uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" +version = "1.4.2" + [[UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" @@ -1445,6 +1484,18 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + [[UnsafeAtomics]] git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" @@ -1452,9 +1503,9 @@ version = "0.2.1" [[UnsafeAtomicsLLVM]] deps = ["LLVM", "UnsafeAtomics"] -git-tree-sha1 = "33af9d2031d0dc09e2be9a0d4beefec4466def8e" +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" -version = "0.1.0" +version = "0.1.2" [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" @@ -1623,15 +1674,15 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[Zygote]] -deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "Requires", "SnoopPrecompile", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] -git-tree-sha1 = "4df8f470806a45a8630ac8f597304821dc8e8838" +deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] +git-tree-sha1 = "5be3ddb88fc992a7d8ea96c3f10a49a7e98ebc7b" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" -version = "0.6.59" +version = "0.6.62" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] @@ -1641,9 +1692,9 @@ version = "0.2.3" [[cuDNN]] deps = ["CEnum", "CUDA", "CUDNN_jll"] -git-tree-sha1 = "3aa15aba7aad5be8b9b3c1b77a9b81e3e1357280" +git-tree-sha1 = "f65490d187861d6222cb38bcbbff3fd949a7ec3e" uuid = "02a925ec-e4fe-4b08-9a7e-0d78e3d38ccd" -version = "1.0.2" +version = "1.0.4" [[fzf_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] diff --git a/tutorials/04-hidden-markov-model/Manifest.toml b/tutorials/04-hidden-markov-model/Manifest.toml index 9b06ca6c8..73f3a407f 100644 --- a/tutorials/04-hidden-markov-model/Manifest.toml +++ b/tutorials/04-hidden-markov-model/Manifest.toml @@ -25,9 +25,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -74,14 +74,32 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" + +[[ArrayInterfaceCore]] +deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "e5f08b5689b1aad068e01751889f2f615c7db36d" +uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" +version = "0.1.29" + +[[ArrayInterfaceStaticArraysCore]] +deps = ["ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] +git-tree-sha1 = "01a9f8e6cfc2bfdd01d333f70b8014a04893103c" +uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" +version = "0.1.4" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -95,10 +113,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -125,6 +143,11 @@ git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" @@ -139,27 +162,27 @@ version = "0.5.1" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -168,10 +191,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -197,9 +220,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -218,9 +241,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -230,9 +259,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -245,9 +274,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -260,12 +289,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -293,9 +316,9 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -308,22 +331,22 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] -git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d" +git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.9.3" +version = "0.8.6" [[Downloads]] deps = ["ArgTools", "LibCURL", "NetworkOptions"] @@ -389,9 +412,9 @@ version = "3.3.10+0" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "7072f1e3e5a8be51d525d64f63d3ec1287ff2790" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "0.13.11" [[FixedPointNumbers]] deps = ["Statistics"] @@ -458,21 +481,21 @@ version = "3.3.8+0" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -498,10 +521,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "CodecZlib", "Dates", "IniFile", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "37e4657cd56b11abe3d10cd4a1ec5fbdb4180263" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.7.4" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -510,21 +533,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -539,9 +557,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -561,9 +579,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -599,9 +617,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -609,11 +627,17 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -627,10 +651,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -645,15 +681,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" - -[[Lazy]] -deps = ["MacroTools"] -git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" -uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0" -version = "0.15.1" +version = "0.16.0" [[LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -750,9 +780,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -794,9 +824,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -837,15 +867,15 @@ uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -855,9 +885,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -900,15 +930,15 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "6503b77492fd7fcb9379bf73cd31035670e3c509" +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.3.3" +version = "1.4.1" [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -929,9 +959,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -944,10 +974,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -971,28 +1001,34 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" + +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1037,9 +1073,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1048,22 +1084,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] +git-tree-sha1 = "a5ce741acddc02f0d4fc6505463ca89697d7fb23" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.32.3" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1096,30 +1132,24 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "RuntimeGeneratedFunctions", "StaticArraysCore", "Statistics", "Tables"] +git-tree-sha1 = "fe89a8113ea445bcff9ee570077830674babb534" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" - -[[SciMLOperators]] -deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" -uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "1.81.0" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1134,9 +1164,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1195,9 +1225,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1216,9 +1246,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1233,10 +1263,10 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1253,12 +1283,6 @@ version = "0.6.15" deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" -[[SymbolicIndexingInterface]] -deps = ["DocStringExtensions"] -git-tree-sha1 = "f8ab052bfcbdb9b48fad2c80c873aa0d0344dfe5" -uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.2.2" - [[TOML]] deps = ["Dates"] uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" @@ -1293,9 +1317,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1303,32 +1327,21 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" - -[[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" -uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" - -[[TruncatedStacktraces]] -deps = ["InteractiveUtils", "MacroTools", "Preferences"] -git-tree-sha1 = "7bc1632a4eafbe9bd94cf1a784a9a4eb5e040a91" -uuid = "781d530d-4396-4725-bb49-402e4bee1e77" -version = "1.3.0" +version = "0.4.76" [[Turing]] deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "Setfield", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker"] @@ -1359,6 +1372,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1532,9 +1568,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/05-linear-regression/Manifest.toml b/tutorials/05-linear-regression/Manifest.toml index 11e4bd4c4..e2e6cfef1 100644 --- a/tutorials/05-linear-regression/Manifest.toml +++ b/tutorials/05-linear-regression/Manifest.toml @@ -1,5 +1,10 @@ # This file is machine-generated - editing it directly is not advised +[[ADTypes]] +git-tree-sha1 = "dcfdf328328f2645531c4ddebf841228aef74130" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.3" + [[AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" @@ -24,16 +29,16 @@ uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" version = "0.4.4" [[Accessors]] -deps = ["Compat", "CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Requires", "StaticArrays", "Test"] -git-tree-sha1 = "beabc31fa319f9de4d16372bff31b4801e43d32c" +deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Requires", "Test"] +git-tree-sha1 = "954634616d5846d8e216df1298be2298d55280b2" uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.28" +version = "0.1.32" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -80,14 +85,20 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -101,10 +112,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -131,11 +142,16 @@ git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[CSV]] -deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings"] -git-tree-sha1 = "c5fd7cd27ac4aed0acf4b73948f0110ff2a854b2" +deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "PrecompileTools", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] +git-tree-sha1 = "44dbf560808d49041989b8a96cae4cffbeb7966a" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.10.7" +version = "0.10.11" [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -151,33 +167,33 @@ version = "0.5.1" [[CategoricalArrays]] deps = ["DataAPI", "Future", "Missings", "Printf", "Requires", "Statistics", "Unicode"] -git-tree-sha1 = "5084cc1a28976dd1642c9f337b28a3cb03e0f7d2" +git-tree-sha1 = "1568b28f91293458345dabba6a5ea3f183250a61" uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597" -version = "0.10.7" +version = "0.10.8" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -186,10 +202,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -215,9 +231,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -236,9 +252,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -248,9 +270,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[ContextVariablesX]] deps = ["Compat", "Logging", "UUIDs"] @@ -269,9 +291,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataFrames]] deps = ["Compat", "DataAPI", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] @@ -290,12 +312,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -323,9 +339,9 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -338,16 +354,16 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -431,9 +447,9 @@ version = "0.1.1" [[FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "7be5f99f7d15578798f338f5433b6c432ea8037b" +git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.0" +version = "1.16.1" [[FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -443,9 +459,9 @@ version = "0.9.20" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "589d3d3bff204bdd80ecc53293896b4f39175723" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "1.1.1" [[FixedPointNumbers]] deps = ["Statistics"] @@ -518,27 +534,27 @@ version = "3.3.8+0" [[GLM]] deps = ["Distributions", "LinearAlgebra", "Printf", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "StatsModels"] -git-tree-sha1 = "cd3e314957dc11c4c905d54d1f5a65c979e4748a" +git-tree-sha1 = "97829cfda0df99ddaeaafb5b370d6cab87b7013e" uuid = "38e38edf-8417-5370-95a0-9cbb8c7f171a" -version = "1.8.2" +version = "1.8.3" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -564,10 +580,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "CodecZlib", "Dates", "IniFile", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "37e4657cd56b11abe3d10cd4a1ec5fbdb4180263" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.7.4" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -576,21 +592,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -611,9 +622,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -633,9 +644,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -671,9 +682,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -687,11 +698,17 @@ git-tree-sha1 = "49fb3cb53362ddadb4415e9b73926d6b40709e70" uuid = "b14d175d-62b4-44ba-8fb7-3064adc8c3ec" version = "0.2.4" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -705,10 +722,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -723,9 +752,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[Lazy]] deps = ["MacroTools"] @@ -828,9 +857,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -872,9 +901,9 @@ version = "0.4.17" [[MLUtils]] deps = ["ChainRulesCore", "Compat", "DataAPI", "DelimitedFiles", "FLoops", "FoldsThreads", "NNlib", "Random", "ShowCases", "SimpleTraits", "Statistics", "StatsBase", "Tables", "Transducers"] -git-tree-sha1 = "f69cdbb5b7c630c02481d81d50eac43697084fe0" +git-tree-sha1 = "ca31739905ddb08c59758726e22b9e25d0d1521b" uuid = "f1d291b0-491e-4a28-83b9-f70985020b54" -version = "0.4.1" +version = "0.4.2" [[MacroTools]] deps = ["Markdown", "Random"] @@ -883,9 +912,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -923,24 +952,24 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[Mocking]] deps = ["Compat", "ExprTools"] -git-tree-sha1 = "782e258e80d68a73d8c916e55f8ced1de00c2cea" +git-tree-sha1 = "4cc0c5a83933648b615c36c2b956d94fda70641e" uuid = "78c3b35d-d492-501b-9361-3d52fe80e533" -version = "0.7.6" +version = "0.7.7" [[MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -956,9 +985,9 @@ version = "0.1.5" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -1001,15 +1030,15 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "6503b77492fd7fcb9379bf73cd31035670e3c509" +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.3.3" +version = "1.4.1" [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1030,9 +1059,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1045,10 +1074,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1072,16 +1101,16 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" [[PooledArrays]] deps = ["DataAPI", "Future"] @@ -1089,11 +1118,17 @@ git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" version = "1.4.2" +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" + [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyPrint]] git-tree-sha1 = "632eb4abab3449ab30c5e1afaa874f0b98b586e4" @@ -1102,9 +1137,9 @@ version = "0.2.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1161,9 +1196,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1172,22 +1207,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.38.5" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1220,30 +1255,30 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "ddf57a23d610d30d0c4bd01132f4646a2a77d171" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" +version = "1.92.5" [[SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "0.2.12" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1258,9 +1293,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1335,9 +1370,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1356,9 +1391,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1374,15 +1409,15 @@ version = "1.3.0" [[StatsModels]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Printf", "REPL", "ShiftedArrays", "SparseArrays", "StatsBase", "StatsFuns", "Tables"] -git-tree-sha1 = "06a230063087c11910e9bbd17ccbf5af792a27a4" +git-tree-sha1 = "8cc7a5385ecaa420f0b3426f9b0135d0df0638ed" uuid = "3eaba693-59b7-5ba5-a881-562e759f1c8d" -version = "0.7.0" +version = "0.7.2" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1439,9 +1474,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1449,32 +1484,32 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[TimeZones]] deps = ["Dates", "Downloads", "InlineStrings", "LazyArtifacts", "Mocking", "Printf", "RecipesBase", "Scratch", "Unicode"] -git-tree-sha1 = "a92ec4466fc6e3dd704e2668b5e7f24add36d242" +git-tree-sha1 = "cdaa0c2a4449724aded839550eca7d7240bb6938" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "1.9.1" +version = "1.10.0" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" +version = "0.1.7" [[TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] @@ -1511,6 +1546,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1546,6 +1604,11 @@ git-tree-sha1 = "de67fa59e33ad156a590055375a30b23c40299d3" uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6" version = "0.5.5" +[[WorkerUtilities]] +git-tree-sha1 = "cd1659ba0d57b71a464a29e64dbc67cfe83d54e7" +uuid = "76eceee3-57b5-4d4a-8e66-0e911cebbf60" +version = "1.6.1" + [[XML2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] git-tree-sha1 = "93c41695bc1c08c46c5899f4fe06d6ead504bb73" @@ -1690,9 +1753,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/06-infinite-mixture-model/Manifest.toml b/tutorials/06-infinite-mixture-model/Manifest.toml index c77016398..807eee61e 100644 --- a/tutorials/06-infinite-mixture-model/Manifest.toml +++ b/tutorials/06-infinite-mixture-model/Manifest.toml @@ -25,9 +25,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -62,14 +62,32 @@ version = "2.3.0" uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" + +[[ArrayInterfaceCore]] +deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "e5f08b5689b1aad068e01751889f2f615c7db36d" +uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" +version = "0.1.29" + +[[ArrayInterfaceStaticArraysCore]] +deps = ["ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] +git-tree-sha1 = "01a9f8e6cfc2bfdd01d333f70b8014a04893103c" +uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" +version = "0.1.4" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -83,10 +101,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -113,6 +131,11 @@ git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" @@ -127,21 +150,21 @@ version = "0.5.1" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -150,10 +173,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -179,9 +202,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -200,9 +223,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -212,9 +241,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -227,9 +256,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -269,31 +298,31 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distributed]] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] -git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d" +git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.9.3" +version = "0.8.6" [[Downloads]] deps = ["ArgTools", "LibCURL", "NetworkOptions"] @@ -359,9 +388,9 @@ version = "3.3.10+0" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "7072f1e3e5a8be51d525d64f63d3ec1287ff2790" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "0.13.11" [[FixedPointNumbers]] deps = ["Statistics"] @@ -428,21 +457,21 @@ version = "3.3.8+0" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -468,10 +497,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "CodecZlib", "Dates", "IniFile", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "37e4657cd56b11abe3d10cd4a1ec5fbdb4180263" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.7.4" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -480,21 +509,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -509,9 +533,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -531,9 +555,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -569,9 +593,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -579,11 +603,17 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -597,10 +627,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -615,15 +657,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" - -[[Lazy]] -deps = ["MacroTools"] -git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" -uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0" -version = "0.15.1" +version = "0.16.0" [[LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -720,9 +756,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -764,9 +800,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -806,10 +842,10 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -819,9 +855,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -849,15 +885,15 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "6503b77492fd7fcb9379bf73cd31035670e3c509" +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.3.3" +version = "1.4.1" [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -878,9 +914,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -893,10 +929,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -920,28 +956,34 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" + +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -986,9 +1028,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -997,22 +1039,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] +git-tree-sha1 = "a5ce741acddc02f0d4fc6505463ca89697d7fb23" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.32.3" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1045,30 +1087,24 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "RuntimeGeneratedFunctions", "StaticArraysCore", "Statistics", "Tables"] +git-tree-sha1 = "fe89a8113ea445bcff9ee570077830674babb534" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" - -[[SciMLOperators]] -deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" -uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "1.81.0" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1138,9 +1174,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1159,9 +1195,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1190,12 +1226,6 @@ version = "0.6.15" deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" -[[SymbolicIndexingInterface]] -deps = ["DocStringExtensions"] -git-tree-sha1 = "f8ab052bfcbdb9b48fad2c80c873aa0d0344dfe5" -uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.2.2" - [[TOML]] deps = ["Dates"] uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" @@ -1224,9 +1254,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1234,32 +1264,21 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" - -[[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" -uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" - -[[TruncatedStacktraces]] -deps = ["InteractiveUtils", "MacroTools", "Preferences"] -git-tree-sha1 = "7bc1632a4eafbe9bd94cf1a784a9a4eb5e040a91" -uuid = "781d530d-4396-4725-bb49-402e4bee1e77" -version = "1.3.0" +version = "0.4.76" [[Turing]] deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "Setfield", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker"] @@ -1290,6 +1309,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1457,9 +1499,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/07-poisson-regression/Manifest.toml b/tutorials/07-poisson-regression/Manifest.toml index a3abcbe04..e6afb1e6f 100644 --- a/tutorials/07-poisson-regression/Manifest.toml +++ b/tutorials/07-poisson-regression/Manifest.toml @@ -25,9 +25,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -74,10 +74,10 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[ArrayInterfaceCore]] deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] @@ -94,6 +94,12 @@ version = "0.1.4" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -107,10 +113,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -126,17 +132,27 @@ git-tree-sha1 = "1234b03e94938e6f2b14834dfd3ef45698d5e14f" uuid = "76274a88-744f-5084-9051-94815aaf08c4" version = "0.10.8" +[[BitFlags]] +git-tree-sha1 = "43b1a4a8f797c1cddadf60499a8a077d4af2cd2d" +uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" +version = "0.1.7" + [[Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[CSV]] -deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "SnoopPrecompile", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] -git-tree-sha1 = "c700cce799b51c9045473de751e9319bdd1c6e94" +deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "PrecompileTools", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] +git-tree-sha1 = "44dbf560808d49041989b8a96cae4cffbeb7966a" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.10.9" +version = "0.10.11" [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -152,33 +168,33 @@ version = "0.5.1" [[CategoricalArrays]] deps = ["DataAPI", "Future", "Missings", "Printf", "Requires", "Statistics", "Unicode"] -git-tree-sha1 = "5084cc1a28976dd1642c9f337b28a3cb03e0f7d2" +git-tree-sha1 = "1568b28f91293458345dabba6a5ea3f183250a61" uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597" -version = "0.10.7" +version = "0.10.8" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -187,10 +203,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -216,9 +232,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -237,9 +253,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -249,9 +271,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -264,9 +286,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataFrames]] deps = ["Compat", "DataAPI", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] @@ -285,12 +307,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -318,9 +334,9 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -333,16 +349,16 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -414,9 +430,9 @@ version = "3.3.10+0" [[FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "7be5f99f7d15578798f338f5433b6c432ea8037b" +git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.0" +version = "1.16.1" [[FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -426,9 +442,9 @@ version = "0.9.20" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "deed294cde3de20ae0b2e0355a6c4e1c6a5ceffc" +git-tree-sha1 = "7072f1e3e5a8be51d525d64f63d3ec1287ff2790" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.12.8" +version = "0.13.11" [[FixedPointNumbers]] deps = ["Statistics"] @@ -495,27 +511,27 @@ version = "3.3.8+0" [[GLM]] deps = ["Distributions", "LinearAlgebra", "Printf", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "StatsModels"] -git-tree-sha1 = "cd3e314957dc11c4c905d54d1f5a65c979e4748a" +git-tree-sha1 = "97829cfda0df99ddaeaafb5b370d6cab87b7013e" uuid = "38e38edf-8417-5370-95a0-9cbb8c7f171a" -version = "1.8.2" +version = "1.8.3" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -541,10 +557,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"] -git-tree-sha1 = "c7ec02c4c6a039a98a15f955462cd7aea5df4508" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "0.8.19" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -553,21 +569,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -588,9 +599,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -610,9 +621,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -648,9 +659,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -658,11 +669,17 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -676,10 +693,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -694,9 +723,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -799,9 +828,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -861,9 +890,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -901,24 +930,24 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[Mocking]] deps = ["Compat", "ExprTools"] -git-tree-sha1 = "782e258e80d68a73d8c916e55f8ced1de00c2cea" +git-tree-sha1 = "4cc0c5a83933648b615c36c2b956d94fda70641e" uuid = "78c3b35d-d492-501b-9361-3d52fe80e533" -version = "0.7.6" +version = "0.7.7" [[MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -928,9 +957,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -971,11 +1000,17 @@ uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" +[[OpenSSL]] +deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" +uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" +version = "1.4.1" + [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -996,9 +1031,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1011,10 +1046,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1038,16 +1073,16 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" [[PooledArrays]] deps = ["DataAPI", "Future"] @@ -1055,17 +1090,23 @@ git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" version = "1.4.2" +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" + [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1122,9 +1163,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1133,16 +1174,16 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] @@ -1181,15 +1222,15 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" @@ -1213,9 +1254,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1241,6 +1282,11 @@ git-tree-sha1 = "91eddf657aca81df9ae6ceb20b959ae5653ad1de" uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f" version = "1.0.3" +[[SimpleBufferStream]] +git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" +uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" +version = "1.1.0" + [[SnoopPrecompile]] deps = ["Preferences"] git-tree-sha1 = "e760a70afdcd461cf01a575947738d359234665c" @@ -1274,9 +1320,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1295,9 +1341,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1313,15 +1359,15 @@ version = "1.3.0" [[StatsModels]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Printf", "REPL", "ShiftedArrays", "SparseArrays", "StatsBase", "StatsFuns", "Tables"] -git-tree-sha1 = "06a230063087c11910e9bbd17ccbf5af792a27a4" +git-tree-sha1 = "8cc7a5385ecaa420f0b3426f9b0135d0df0638ed" uuid = "3eaba693-59b7-5ba5-a881-562e759f1c8d" -version = "0.7.0" +version = "0.7.2" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1372,9 +1418,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1382,27 +1428,27 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[TimeZones]] deps = ["Dates", "Downloads", "InlineStrings", "LazyArtifacts", "Mocking", "Printf", "RecipesBase", "Scratch", "Unicode"] -git-tree-sha1 = "a92ec4466fc6e3dd704e2668b5e7f24add36d242" +git-tree-sha1 = "cdaa0c2a4449724aded839550eca7d7240bb6938" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "1.9.1" +version = "1.10.0" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Turing]] deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "Setfield", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker"] @@ -1410,6 +1456,11 @@ git-tree-sha1 = "8a40377bcc4b054ebdc8f680e96cd73a4a6fe2e6" uuid = "fce5fe82-541a-59a6-adf8-730c64b5f9a0" version = "0.22.0" +[[URIs]] +git-tree-sha1 = "074f993b0ca030848b897beff716d93aca60f06a" +uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" +version = "1.4.2" + [[UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" @@ -1428,6 +1479,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1612,9 +1686,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/08-multinomial-logistic-regression/Manifest.toml b/tutorials/08-multinomial-logistic-regression/Manifest.toml index fa0bec13a..5353bfb25 100644 --- a/tutorials/08-multinomial-logistic-regression/Manifest.toml +++ b/tutorials/08-multinomial-logistic-regression/Manifest.toml @@ -1,5 +1,10 @@ # This file is machine-generated - editing it directly is not advised +[[ADTypes]] +git-tree-sha1 = "dcfdf328328f2645531c4ddebf841228aef74130" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.3" + [[AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" @@ -25,9 +30,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -74,14 +79,20 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -95,10 +106,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -125,11 +136,16 @@ git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[CSV]] -deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "SnoopPrecompile", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] -git-tree-sha1 = "c700cce799b51c9045473de751e9319bdd1c6e94" +deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "PrecompileTools", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] +git-tree-sha1 = "44dbf560808d49041989b8a96cae4cffbeb7966a" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.10.9" +version = "0.10.11" [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -145,33 +161,33 @@ version = "0.5.1" [[CategoricalArrays]] deps = ["DataAPI", "Future", "Missings", "Printf", "Requires", "Statistics", "Unicode"] -git-tree-sha1 = "5084cc1a28976dd1642c9f337b28a3cb03e0f7d2" +git-tree-sha1 = "1568b28f91293458345dabba6a5ea3f183250a61" uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597" -version = "0.10.7" +version = "0.10.8" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -180,10 +196,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -209,9 +225,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -230,9 +246,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -242,9 +264,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -257,9 +279,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataFrames]] deps = ["Compat", "DataAPI", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] @@ -278,12 +300,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -311,9 +327,9 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -326,16 +342,16 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -407,9 +423,9 @@ version = "3.3.10+0" [[FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "7be5f99f7d15578798f338f5433b6c432ea8037b" +git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.0" +version = "1.16.1" [[FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -419,9 +435,9 @@ version = "0.9.20" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "589d3d3bff204bdd80ecc53293896b4f39175723" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "1.1.1" [[FixedPointNumbers]] deps = ["Statistics"] @@ -488,21 +504,21 @@ version = "3.3.8+0" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -528,10 +544,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "CodecZlib", "Dates", "IniFile", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "37e4657cd56b11abe3d10cd4a1ec5fbdb4180263" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.7.4" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -540,21 +556,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -575,9 +586,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -597,9 +608,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -635,9 +646,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -645,11 +656,17 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -663,10 +680,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -681,9 +710,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[Lazy]] deps = ["MacroTools"] @@ -792,9 +821,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -854,9 +883,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -894,24 +923,24 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[Mocking]] deps = ["Compat", "ExprTools"] -git-tree-sha1 = "782e258e80d68a73d8c916e55f8ced1de00c2cea" +git-tree-sha1 = "4cc0c5a83933648b615c36c2b956d94fda70641e" uuid = "78c3b35d-d492-501b-9361-3d52fe80e533" -version = "0.7.6" +version = "0.7.7" [[MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -921,9 +950,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -966,15 +995,15 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "6503b77492fd7fcb9379bf73cd31035670e3c509" +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.3.3" +version = "1.4.1" [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -995,9 +1024,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1010,10 +1039,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1037,16 +1066,16 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" [[PooledArrays]] deps = ["DataAPI", "Future"] @@ -1054,17 +1083,23 @@ git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" version = "1.4.2" +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" + [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1121,9 +1156,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1132,22 +1167,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.38.5" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1180,30 +1215,30 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "ddf57a23d610d30d0c4bd01132f4646a2a77d171" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" +version = "1.92.5" [[SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "0.2.12" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1218,9 +1253,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1279,9 +1314,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1300,9 +1335,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1317,10 +1352,10 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1377,9 +1412,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1387,32 +1422,32 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[TimeZones]] deps = ["Dates", "Downloads", "InlineStrings", "LazyArtifacts", "Mocking", "Printf", "RecipesBase", "Scratch", "Unicode"] -git-tree-sha1 = "a92ec4466fc6e3dd704e2668b5e7f24add36d242" +git-tree-sha1 = "cdaa0c2a4449724aded839550eca7d7240bb6938" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "1.9.1" +version = "1.10.0" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" +version = "0.1.7" [[TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] @@ -1449,6 +1484,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1633,9 +1691,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/09-variational-inference/Manifest.toml b/tutorials/09-variational-inference/Manifest.toml index 49dd487c5..31922cd14 100644 --- a/tutorials/09-variational-inference/Manifest.toml +++ b/tutorials/09-variational-inference/Manifest.toml @@ -1,5 +1,10 @@ # This file is machine-generated - editing it directly is not advised +[[ADTypes]] +git-tree-sha1 = "dcfdf328328f2645531c4ddebf841228aef74130" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.3" + [[AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" @@ -24,16 +29,16 @@ uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" version = "0.4.4" [[Accessors]] -deps = ["Compat", "CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Requires", "StaticArrays", "Test"] -git-tree-sha1 = "beabc31fa319f9de4d16372bff31b4801e43d32c" +deps = ["CompositionsBase", "ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "MacroTools", "Requires", "Test"] +git-tree-sha1 = "954634616d5846d8e216df1298be2298d55280b2" uuid = "7d9f7c33-5ae7-4f3b-8dc6-eff91059b697" -version = "0.1.28" +version = "0.1.32" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -80,22 +85,10 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" - -[[ArrayInterfaceCore]] -deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "e5f08b5689b1aad068e01751889f2f615c7db36d" -uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" -version = "0.1.29" - -[[ArrayInterfaceStaticArraysCore]] -deps = ["ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] -git-tree-sha1 = "01a9f8e6cfc2bfdd01d333f70b8014a04893103c" -uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" -version = "0.1.4" +version = "7.4.8" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -125,10 +118,10 @@ uuid = "ab4f0b2a-ad5b-11e8-123f-65d77653426b" version = "0.4.2" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -144,6 +137,11 @@ git-tree-sha1 = "1234b03e94938e6f2b14834dfd3ef45698d5e14f" uuid = "76274a88-744f-5084-9051-94815aaf08c4" version = "0.10.8" +[[BitFlags]] +git-tree-sha1 = "43b1a4a8f797c1cddadf60499a8a077d4af2cd2d" +uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" +version = "0.1.7" + [[Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" @@ -156,34 +154,34 @@ uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" version = "0.4.2" [[CSV]] -deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "SnoopPrecompile", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] -git-tree-sha1 = "c700cce799b51c9045473de751e9319bdd1c6e94" +deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "PrecompileTools", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] +git-tree-sha1 = "44dbf560808d49041989b8a96cae4cffbeb7966a" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.10.9" +version = "0.10.11" [[CUDA]] deps = ["AbstractFFTs", "Adapt", "BFloat16s", "CEnum", "CUDA_Driver_jll", "CUDA_Runtime_Discovery", "CUDA_Runtime_jll", "CompilerSupportLibraries_jll", "ExprTools", "GPUArrays", "GPUCompiler", "KernelAbstractions", "LLVM", "LazyArtifacts", "Libdl", "LinearAlgebra", "Logging", "Preferences", "Printf", "Random", "Random123", "RandomNumbers", "Reexport", "Requires", "SparseArrays", "SpecialFunctions", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "2dbdec5c010bed6c6b1e0e5fd213bfe47925abc3" +git-tree-sha1 = "442d989978ed3ff4e174c928ee879dc09d1ef693" uuid = "052768ef-5323-5732-b1bb-66c8b64840ba" -version = "4.1.0" +version = "4.3.2" [[CUDA_Driver_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] -git-tree-sha1 = "a1efe2bfb96c10906dede10f1580aca0ae6d092f" +git-tree-sha1 = "498f45593f6ddc0adff64a9310bb6710e851781b" uuid = "4ee394cb-3365-5eb0-8335-949819d2adfc" -version = "0.4.0+2" +version = "0.5.0+1" [[CUDA_Runtime_Discovery]] deps = ["Libdl"] -git-tree-sha1 = "58dd8ec29f54f08c04b052d2c2fa6760b4f4b3a4" +git-tree-sha1 = "bcc4a23cbbd99c8535a5318455dcf0f2546ec536" uuid = "1af6417a-86b4-443c-805f-a4643ffb695f" -version = "0.1.1" +version = "0.2.2" [[CUDA_Runtime_jll]] deps = ["Artifacts", "CUDA_Driver_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "96e06a24c89a9945c57278fd09fb717f71476d87" +git-tree-sha1 = "5248d9c45712e51e27ba9b30eebec65658c6ce29" uuid = "76a88914-d11a-5bdc-97e0-2f5a05c973a2" -version = "0.4.0+2" +version = "0.6.0+0" [[CUDNN_jll]] deps = ["Artifacts", "CUDA_Runtime_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] @@ -205,33 +203,33 @@ version = "0.5.1" [[CategoricalArrays]] deps = ["DataAPI", "Future", "Missings", "Printf", "Requires", "Statistics", "Unicode"] -git-tree-sha1 = "5084cc1a28976dd1642c9f337b28a3cb03e0f7d2" +git-tree-sha1 = "1568b28f91293458345dabba6a5ea3f183250a61" uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597" -version = "0.10.7" +version = "0.10.8" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -240,10 +238,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -269,9 +267,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -290,15 +288,21 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[ComponentArrays]] -deps = ["ArrayInterface", "ChainRulesCore", "LinearAlgebra", "Requires", "StaticArrayInterface"] -git-tree-sha1 = "2736dee49260e412a352b2d0a37fb863f9a5b559" +deps = ["ArrayInterface", "ChainRulesCore", "ConstructionBase", "ForwardDiff", "GPUArrays", "LinearAlgebra", "RecursiveArrayTools", "Requires", "ReverseDiff", "SciMLBase", "StaticArrayInterface", "StaticArrays"] +git-tree-sha1 = "e97cf3da19e8f955db71e0c2a6c752625019e8be" uuid = "b0b7db55-cfe3-40fc-9ded-d10e2dbeff66" -version = "0.13.8" +version = "0.13.10" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -308,9 +312,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[ContextVariablesX]] deps = ["Compat", "Logging", "UUIDs"] @@ -329,9 +333,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataFrames]] deps = ["Compat", "DataAPI", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] @@ -350,12 +354,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -383,37 +381,37 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] -deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] -git-tree-sha1 = "49eba9ad9f7ead780bfb7ee319f962c811c6d3b2" +deps = ["LinearAlgebra", "Statistics"] +git-tree-sha1 = "a5b88815e6984e9f3256b6ca0dc63109b16a506f" uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" -version = "0.10.8" +version = "0.9.2" [[Distributed]] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] -git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" +git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.8.6" +version = "0.9.3" [[Downloads]] deps = ["ArgTools", "LibCURL", "NetworkOptions"] @@ -491,9 +489,9 @@ version = "0.1.1" [[FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "7be5f99f7d15578798f338f5433b6c432ea8037b" +git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.0" +version = "1.16.1" [[FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -503,9 +501,9 @@ version = "0.9.20" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "589d3d3bff204bdd80ecc53293896b4f39175723" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "1.1.1" [[FixedPointNumbers]] deps = ["Statistics"] @@ -514,10 +512,10 @@ uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93" version = "0.8.4" [[Flux]] -deps = ["Adapt", "CUDA", "ChainRulesCore", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "NNlibCUDA", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "Zygote", "cuDNN"] -git-tree-sha1 = "e657a9aad824de4211606f113edd0b50d5e1f6db" +deps = ["Adapt", "CUDA", "ChainRulesCore", "Functors", "LinearAlgebra", "MLUtils", "MacroTools", "NNlib", "NNlibCUDA", "OneHotArrays", "Optimisers", "Preferences", "ProgressLogging", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "Zygote", "cuDNN"] +git-tree-sha1 = "64005071944bae14fc145661f617eb68b339189c" uuid = "587475ba-b771-5e3f-ad9e-33799f191a9c" -version = "0.13.14" +version = "0.13.16" [[FoldsThreads]] deps = ["Accessors", "FunctionWrappers", "InitialValues", "SplittablesBase", "Transducers"] @@ -584,39 +582,39 @@ version = "3.3.8+0" [[GLM]] deps = ["Distributions", "LinearAlgebra", "Printf", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "StatsModels"] -git-tree-sha1 = "cd3e314957dc11c4c905d54d1f5a65c979e4748a" +git-tree-sha1 = "97829cfda0df99ddaeaafb5b370d6cab87b7013e" uuid = "38e38edf-8417-5370-95a0-9cbb8c7f171a" -version = "1.8.2" +version = "1.8.3" [[GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] -git-tree-sha1 = "7a2e790b1e2e6f648cfb25c4500c5de1f7b375ef" +git-tree-sha1 = "a3351bc577a6b49297248aadc23a4add1097c2ac" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "8.6.5" +version = "8.7.1" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GPUCompiler]] -deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "TimerOutputs", "UUIDs"] -git-tree-sha1 = "fd6431121f31fed05a5386ac88b9bb3f97fdfa69" +deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "Scratch", "TimerOutputs", "UUIDs"] +git-tree-sha1 = "cb090aea21c6ca78d59672a7e7d13bd56d09de64" uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" -version = "0.18.0" +version = "0.20.3" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -642,10 +640,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"] -git-tree-sha1 = "c7ec02c4c6a039a98a15f955462cd7aea5df4508" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "0.8.19" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -654,27 +652,22 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" +version = "0.4.10" [[IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" uuid = "615f187c-cbe4-4ef1-ba3b-2fcf58d6d173" version = "0.1.1" -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" - [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" uuid = "22cec73e-a1b8-11e9-2c92-598750a2cf9c" @@ -694,9 +687,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -716,9 +709,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -754,9 +747,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -771,16 +764,16 @@ uuid = "b14d175d-62b4-44ba-8fb7-3064adc8c3ec" version = "0.2.4" [[KernelAbstractions]] -deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "SnoopPrecompile", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] -git-tree-sha1 = "17d0bb94eef881b09c57967be12cca70fefb3304" +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" -version = "0.9.0" +version = "0.9.4" [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -796,20 +789,20 @@ version = "3.0.0+1" [[LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] -git-tree-sha1 = "f044a2796a9e18e0531b9b3072b0019a61f264bc" +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "4.17.1" +version = "5.2.0" [[LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "070e4b5b65827f82c16ae0916376cb47377aa1b5" +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.18+0" +version = "0.0.22+0" [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -824,9 +817,15 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" + +[[Lazy]] +deps = ["MacroTools"] +git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" +uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0" +version = "0.15.1" [[LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -923,9 +922,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -967,9 +966,9 @@ version = "0.4.17" [[MLUtils]] deps = ["ChainRulesCore", "Compat", "DataAPI", "DelimitedFiles", "FLoops", "FoldsThreads", "NNlib", "Random", "ShowCases", "SimpleTraits", "Statistics", "StatsBase", "Tables", "Transducers"] -git-tree-sha1 = "f69cdbb5b7c630c02481d81d50eac43697084fe0" +git-tree-sha1 = "ca31739905ddb08c59758726e22b9e25d0d1521b" uuid = "f1d291b0-491e-4a28-83b9-f70985020b54" -version = "0.4.1" +version = "0.4.2" [[MacroTools]] deps = ["Markdown", "Random"] @@ -978,9 +977,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -1018,24 +1017,24 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[Mocking]] deps = ["Compat", "ExprTools"] -git-tree-sha1 = "782e258e80d68a73d8c916e55f8ced1de00c2cea" +git-tree-sha1 = "4cc0c5a83933648b615c36c2b956d94fda70641e" uuid = "78c3b35d-d492-501b-9361-3d52fe80e533" -version = "0.7.6" +version = "0.7.7" [[MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NNlibCUDA]] deps = ["Adapt", "CUDA", "LinearAlgebra", "NNlib", "Random", "Statistics", "cuDNN"] @@ -1057,9 +1056,9 @@ version = "0.1.5" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -1106,11 +1105,17 @@ uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" +[[OpenSSL]] +deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" +uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" +version = "1.4.1" + [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1131,9 +1136,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1146,10 +1151,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1173,16 +1178,16 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" [[PooledArrays]] deps = ["DataAPI", "Future"] @@ -1190,11 +1195,17 @@ git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" version = "1.4.2" +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" + [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyPrint]] git-tree-sha1 = "632eb4abab3449ab30c5e1afaa874f0b98b586e4" @@ -1203,9 +1214,9 @@ version = "0.2.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1257,9 +1268,9 @@ uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[Random123]] deps = ["Random", "RandomNumbers"] -git-tree-sha1 = "7a1a306b72cfa60634f03a911405f4e64d1b718b" +git-tree-sha1 = "552f30e847641591ba3f39fd1bed559b9deb0ef3" uuid = "74087812-796a-5b5d-8853-05524746bad3" -version = "1.6.0" +version = "1.6.1" [[RandomNumbers]] deps = ["Random", "Requires"] @@ -1274,9 +1285,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1285,22 +1296,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] -git-tree-sha1 = "a5ce741acddc02f0d4fc6505463ca89697d7fb23" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.32.3" +version = "2.38.5" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1319,6 +1330,12 @@ git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7" uuid = "ae029012-a4dd-5104-9daa-d747884805df" version = "1.3.0" +[[ReverseDiff]] +deps = ["ChainRulesCore", "DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] +git-tree-sha1 = "5fb7c1053046a80b53cf9c0ef8526ea656de7b8c" +uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" +version = "1.14.6" + [[Rmath]] deps = ["Random", "Rmath_jll"] git-tree-sha1 = "f65dcb5fa46aee0cf9ed6274ccbd597adc49aa7b" @@ -1333,24 +1350,30 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "RuntimeGeneratedFunctions", "StaticArraysCore", "Statistics", "Tables"] -git-tree-sha1 = "fe89a8113ea445bcff9ee570077830674babb534" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "ddf57a23d610d30d0c4bd01132f4646a2a77d171" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.81.0" +version = "1.92.5" + +[[SciMLOperators]] +deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" +uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" +version = "0.2.12" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1365,9 +1388,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1398,6 +1421,11 @@ git-tree-sha1 = "91eddf657aca81df9ae6ceb20b959ae5653ad1de" uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f" version = "1.0.3" +[[SimpleBufferStream]] +git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" +uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" +version = "1.1.0" + [[SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231" @@ -1437,21 +1465,21 @@ version = "0.1.15" [[Static]] deps = ["IfElse"] -git-tree-sha1 = "08be5ee09a7632c32695d954a602df96a877bf0d" +git-tree-sha1 = "dbde6766fc677423598138a5951269432b0fcc90" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.8.6" +version = "0.8.7" [[StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "fd5f417fd7e103c121b0a0b4a6902f03991111f4" +git-tree-sha1 = "33040351d2403b84afce74dae2e22d3f5b18edcb" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.3.0" +version = "1.4.0" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1470,9 +1498,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1488,15 +1516,15 @@ version = "1.3.0" [[StatsModels]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Printf", "REPL", "ShiftedArrays", "SparseArrays", "StatsBase", "StatsFuns", "Tables"] -git-tree-sha1 = "06a230063087c11910e9bbd17ccbf5af792a27a4" +git-tree-sha1 = "8cc7a5385ecaa420f0b3426f9b0135d0df0638ed" uuid = "3eaba693-59b7-5ba5-a881-562e759f1c8d" -version = "0.7.0" +version = "0.7.2" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1513,6 +1541,12 @@ version = "0.6.15" deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" +[[SymbolicIndexingInterface]] +deps = ["DocStringExtensions"] +git-tree-sha1 = "f8ab052bfcbdb9b48fad2c80c873aa0d0344dfe5" +uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" +version = "0.2.2" + [[TOML]] deps = ["Dates"] uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" @@ -1547,9 +1581,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1557,33 +1591,44 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[TimeZones]] deps = ["Dates", "Downloads", "InlineStrings", "LazyArtifacts", "Mocking", "Printf", "RecipesBase", "Scratch", "Unicode"] -git-tree-sha1 = "a92ec4466fc6e3dd704e2668b5e7f24add36d242" +git-tree-sha1 = "cdaa0c2a4449724aded839550eca7d7240bb6938" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "1.9.1" +version = "1.10.0" [[TimerOutputs]] deps = ["ExprTools", "Printf"] -git-tree-sha1 = "f2fd3f288dfc6f507b0c3a2eb3bac009251e548b" +git-tree-sha1 = "f548a9e9c490030e545f72074a41edfd0e5bcdd7" uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" -version = "0.5.22" +version = "0.5.23" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" + +[[Tricks]] +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" +uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" +version = "0.1.7" + +[[TruncatedStacktraces]] +deps = ["InteractiveUtils", "MacroTools", "Preferences"] +git-tree-sha1 = "7bc1632a4eafbe9bd94cf1a784a9a4eb5e040a91" +uuid = "781d530d-4396-4725-bb49-402e4bee1e77" +version = "1.3.0" [[Turing]] deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "Setfield", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker"] @@ -1591,6 +1636,11 @@ git-tree-sha1 = "8a40377bcc4b054ebdc8f680e96cd73a4a6fe2e6" uuid = "fce5fe82-541a-59a6-adf8-730c64b5f9a0" version = "0.22.0" +[[URIs]] +git-tree-sha1 = "074f993b0ca030848b897beff716d93aca60f06a" +uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" +version = "1.4.2" + [[UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" @@ -1609,6 +1659,18 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + [[UnsafeAtomics]] git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" @@ -1616,9 +1678,9 @@ version = "0.2.1" [[UnsafeAtomicsLLVM]] deps = ["LLVM", "UnsafeAtomics"] -git-tree-sha1 = "33af9d2031d0dc09e2be9a0d4beefec4466def8e" +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" -version = "0.1.0" +version = "0.1.2" [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" @@ -1804,15 +1866,15 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[Zygote]] -deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "Requires", "SnoopPrecompile", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] -git-tree-sha1 = "4df8f470806a45a8630ac8f597304821dc8e8838" +deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] +git-tree-sha1 = "5be3ddb88fc992a7d8ea96c3f10a49a7e98ebc7b" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" -version = "0.6.59" +version = "0.6.62" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] @@ -1822,9 +1884,9 @@ version = "0.2.3" [[cuDNN]] deps = ["CEnum", "CUDA", "CUDNN_jll"] -git-tree-sha1 = "3aa15aba7aad5be8b9b3c1b77a9b81e3e1357280" +git-tree-sha1 = "f65490d187861d6222cb38bcbbff3fd949a7ec3e" uuid = "02a925ec-e4fe-4b08-9a7e-0d78e3d38ccd" -version = "1.0.2" +version = "1.0.4" [[fzf_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] diff --git a/tutorials/10-bayesian-differential-equations/Manifest.toml b/tutorials/10-bayesian-differential-equations/Manifest.toml index 6c971a364..224ac905d 100644 --- a/tutorials/10-bayesian-differential-equations/Manifest.toml +++ b/tutorials/10-bayesian-differential-equations/Manifest.toml @@ -1,5 +1,10 @@ # This file is machine-generated - editing it directly is not advised +[[ADTypes]] +git-tree-sha1 = "dcfdf328328f2645531c4ddebf841228aef74130" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.3" + [[AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" @@ -25,9 +30,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -80,10 +85,10 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[ArrayInterfaceCore]] deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] @@ -93,13 +98,19 @@ version = "0.1.29" [[ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "4aff5fa660eb95c2e0deb6bcdabe4d9a96bc4667" +git-tree-sha1 = "8826f66b370c91648a4351062427ba5391ccf953" uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a" -version = "0.8.18" +version = "1.0.5" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -113,16 +124,16 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BandedMatrices]] -deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "SnoopPrecompile", "SparseArrays"] -git-tree-sha1 = "04f8147bbf7ea9a72f957c9b4095909df3ab21b1" +deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "PrecompileTools", "SparseArrays"] +git-tree-sha1 = "f808fe47e9c0678c5553370818433b8d3a6e59ff" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "0.17.17" +version = "0.17.27" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -167,10 +178,10 @@ uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" version = "0.4.2" [[CPUSummary]] -deps = ["CpuId", "IfElse", "Static"] -git-tree-sha1 = "2c144ddb46b552f72d7eafe7cc2f50746e41ea21" +deps = ["CpuId", "IfElse", "PrecompileTools", "Static"] +git-tree-sha1 = "89e0654ed8c7aebad6d5ad235d6242c2d737a928" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.2.2" +version = "0.2.3" [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -191,21 +202,21 @@ version = "0.3.11" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[CloseOpenIntervals]] deps = ["Static", "StaticArrayInterface"] @@ -215,9 +226,9 @@ version = "0.1.12" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -226,10 +237,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -255,9 +266,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -276,9 +287,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -288,9 +305,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -309,9 +326,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -324,12 +341,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -356,22 +367,22 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d" version = "0.4.0" [[DiffEqBase]] -deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] -git-tree-sha1 = "15a24aa2414fad34136724c4a16e556f264ddd11" +deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] +git-tree-sha1 = "0a7dd11dd243a1f8c71f72f2e5fd54c0bfdeaaab" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.122.1" +version = "6.125.1" [[DiffEqCallbacks]] deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "b497f63a13fe37e03ed7ac72d71b72aad17b46c4" +git-tree-sha1 = "63b6be7b396ad395825f3cc48c56b53bfaf7e69d" uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def" -version = "2.26.0" +version = "2.26.1" [[DiffEqNoiseProcess]] -deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArrays", "Statistics"] -git-tree-sha1 = "2c4ed3eedb87579bfe9f20ecc2440de06b9f3b89" +deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArraysCore", "Statistics"] +git-tree-sha1 = "50f82e2a705a544af539acc6a03674a4d7eee1d8" uuid = "77a26b50-5914-5dd7-bc55-306e6241c503" -version = "5.16.0" +version = "5.17.1" [[DiffResults]] deps = ["StaticArraysCore"] @@ -381,15 +392,15 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[DifferentialEquations]] deps = ["BoundaryValueDiffEq", "DelayDiffEq", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "JumpProcesses", "LinearAlgebra", "LinearSolve", "NonlinearSolve", "OrdinaryDiffEq", "Random", "RecursiveArrayTools", "Reexport", "SciMLBase", "SteadyStateDiffEq", "StochasticDiffEq", "Sundials"] -git-tree-sha1 = "ac145e3d718157c679fc4febf2fcef73ec77b067" +git-tree-sha1 = "1cfe0178410e1bb4b14058c537d0f347eb9d95dc" uuid = "0c46a032-eb83-5123-abaf-570d42b7fbaa" -version = "7.7.0" +version = "7.8.0" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -402,16 +413,16 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -454,21 +465,21 @@ version = "1.0.4" [[Enzyme]] deps = ["CEnum", "EnzymeCore", "Enzyme_jll", "GPUCompiler", "LLVM", "Libdl", "LinearAlgebra", "ObjectFile", "Printf", "Random"] -git-tree-sha1 = "6249c3e023101edeb71e5c476c8945bd078e29e2" +git-tree-sha1 = "28c09cee567a3b62a8ae2a99035bd477fdbaee3f" uuid = "7da242da-08ed-463a-9acd-ee780be4f1d9" -version = "0.10.18" +version = "0.11.0" [[EnzymeCore]] deps = ["Adapt"] -git-tree-sha1 = "238032b8e2a02e06bc8e257ff9484a96db8fea1b" +git-tree-sha1 = "d0840cfff51e34729d20fd7d0a13938dc983878b" uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" -version = "0.1.0" +version = "0.3.0" [[Enzyme_jll]] -deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg", "TOML"] -git-tree-sha1 = "ab56cf1c49ca27bce4e4f7cc91889cedfe83bd03" +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "b83b072e7a5eee2050800658f5676b0ff7b37dc6" uuid = "7cc45869-7501-5eee-bdea-0790c847d4ef" -version = "0.0.48+1" +version = "0.0.53+0" [[Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -530,15 +541,15 @@ version = "1.2.9" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "589d3d3bff204bdd80ecc53293896b4f39175723" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "1.1.1" [[FiniteDiff]] deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "03fcb1c42ec905d15b305359603888ec3e65f886" +git-tree-sha1 = "c6e4a1fbe73b31a3dea94b1da449503b8830c306" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.19.0" +version = "2.21.1" [[FixedPointNumbers]] deps = ["Statistics"] @@ -605,33 +616,33 @@ version = "3.3.8+0" [[GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] -git-tree-sha1 = "7a2e790b1e2e6f648cfb25c4500c5de1f7b375ef" +git-tree-sha1 = "a3351bc577a6b49297248aadc23a4add1097c2ac" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "8.6.5" +version = "8.7.1" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GPUCompiler]] -deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "TimerOutputs", "UUIDs"] -git-tree-sha1 = "19d693666a304e8c371798f4900f7435558c7cde" +deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "Scratch", "TimerOutputs", "UUIDs"] +git-tree-sha1 = "5737dc242dadd392d934ee330c69ceff47f0259c" uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" -version = "0.17.3" +version = "0.19.4" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[GenericSchur]] deps = ["LinearAlgebra", "Printf"] @@ -669,10 +680,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "CodecZlib", "Dates", "IniFile", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "37e4657cd56b11abe3d10cd4a1ec5fbdb4180263" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.7.4" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -687,16 +698,16 @@ uuid = "3e5b6fbb-0976-4d2c-9146-d79de83f2fb0" version = "0.1.14" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" +version = "0.4.10" [[IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" @@ -708,11 +719,6 @@ git-tree-sha1 = "5cd07aab533df5170988219191dfad0519391428" uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9" version = "0.1.3" -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" - [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" uuid = "22cec73e-a1b8-11e9-2c92-598750a2cf9c" @@ -726,9 +732,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -742,15 +748,15 @@ version = "0.14.7" [[IntervalSets]] deps = ["Dates", "Random", "Statistics"] -git-tree-sha1 = "3f91cd3f56ea48d4d2a75c2a65455c5fc74fa347" +git-tree-sha1 = "16c0cc91853084cb5f58a78bd209513900206ce6" uuid = "8197267c-284f-5f27-9208-e0e47529a953" -version = "0.7.3" +version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -767,12 +773,6 @@ git-tree-sha1 = "fa6287a4469f5e048d763df38279ee729fbd44e5" uuid = "c8e1da08-722c-5040-9ed9-7db0dc04731e" version = "1.4.0" -[[IterativeSolvers]] -deps = ["LinearAlgebra", "Printf", "Random", "RecipesBase", "SparseArrays"] -git-tree-sha1 = "1169632f425f79429f245113b775a0e3d121457c" -uuid = "42fd0dbc-a981-5370-80f2-aaf504508153" -version = "0.9.2" - [[IteratorInterfaceExtensions]] git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856" uuid = "82899510-4779-5014-852e-03e436cf321d" @@ -792,9 +792,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -804,9 +804,9 @@ version = "2.1.91+0" [[JumpProcesses]] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "TreeViews", "UnPack"] -git-tree-sha1 = "341cb268f83a2d214f12ba214489fb8fde2e3c54" +git-tree-sha1 = "50bd271af7f6cc23be7d24c8c4804809bb5d05ae" uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5" -version = "9.6.0" +version = "9.6.3" [[KLU]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] @@ -814,23 +814,23 @@ git-tree-sha1 = "764164ed65c30738750965d55652db9c94c59bfe" uuid = "ef3ab10e-7fda-4108-b977-705223b18434" version = "0.4.0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "dd90aacbfb622f898a97c2a4411ac49101ebab8a" +git-tree-sha1 = "0356a64062656b0cbb43c504ad5de338251f4bda" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.0" - -[[KrylovKit]] -deps = ["ChainRulesCore", "GPUArraysCore", "LinearAlgebra", "Printf"] -git-tree-sha1 = "1a5e1d9941c783b0119897d29f2eb665d876ecf3" -uuid = "0b1a1467-8014-51b9-945f-bf0ae24f4b77" -version = "0.6.0" +version = "0.9.1" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -846,20 +846,20 @@ version = "3.0.0+1" [[LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] -git-tree-sha1 = "f044a2796a9e18e0531b9b3072b0019a61f264bc" +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "4.17.1" +version = "5.2.0" [[LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "070e4b5b65827f82c16ae0916376cb47377aa1b5" +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.18+0" +version = "0.0.22+0" [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -874,9 +874,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[LayoutPointers]] deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface"] @@ -990,10 +990,10 @@ deps = ["Libdl"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[LinearSolve]] -deps = ["ArrayInterface", "DocStringExtensions", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SnoopPrecompile", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"] -git-tree-sha1 = "efd515f4ffa96f7b4a3be2e9db9ba7dbce9a342b" +deps = ["ArrayInterface", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "LinearAlgebra", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"] +git-tree-sha1 = "d829e01d7557f0c755dbb34ade286b9742734b4d" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "1.40.0" +version = "2.1.12" [[LogDensityProblems]] deps = ["ArgCheck", "DocStringExtensions", "Random", "Requires", "UnPack"] @@ -1003,9 +1003,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -1017,10 +1017,10 @@ uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" version = "0.4.9" [[LoopVectorization]] -deps = ["ArrayInterface", "ArrayInterfaceCore", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDTypes", "SLEEFPirates", "SnoopPrecompile", "SpecialFunctions", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "6d878b416680b7eaf5fae71990028c982e7c8b38" +deps = ["ArrayInterface", "ArrayInterfaceCore", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "SpecialFunctions", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "3bb62b5003bc7d2d49f26663484267dc49fa1bf5" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.153" +version = "0.12.159" [[MCMCChains]] deps = ["AbstractMCMC", "AxisArrays", "Dates", "Distributions", "Formatting", "IteratorInterfaceExtensions", "KernelDensity", "LinearAlgebra", "MCMCDiagnosticTools", "MLJModelInterface", "NaturalSort", "OrderedCollections", "PrettyTables", "Random", "RecipesBase", "Serialization", "Statistics", "StatsBase", "StatsFuns", "TableTraits", "Tables"] @@ -1058,9 +1058,9 @@ uuid = "d125e4d3-2237-4719-b19c-fa641b8a4667" version = "0.1.8" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -1106,9 +1106,9 @@ version = "0.2.4" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NLSolversBase]] deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"] @@ -1123,10 +1123,10 @@ uuid = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" version = "4.5.1" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -1136,9 +1136,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -1155,10 +1155,10 @@ version = "0.4.13" uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" [[NonlinearSolve]] -deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] -git-tree-sha1 = "f5790fba251930ff04479ea0bad9faea6af4d352" +deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] +git-tree-sha1 = "2a7f28c62eb2c16b9c375c38f664cdcf22313cf5" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "1.5.1" +version = "1.8.0" [[ObjectFile]] deps = ["Reexport", "StructIO"] @@ -1193,15 +1193,15 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "6503b77492fd7fcb9379bf73cd31035670e3c509" +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.3.3" +version = "1.4.1" [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -1211,9 +1211,9 @@ version = "0.5.5+0" [[Optim]] deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "1903afc76b7d01719d9c30d3c7d501b61db96721" +git-tree-sha1 = "e3a6546c1577bfd701771b477b794a52949e7594" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.7.4" +version = "1.7.6" [[Optimisers]] deps = ["ChainRulesCore", "Functors", "LinearAlgebra", "Random", "Statistics"] @@ -1228,15 +1228,15 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SimpleNonlinearSolve", "SimpleUnPack", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] -git-tree-sha1 = "9fb1f72106bfa1370006b90771cfbcce6c7468b6" +deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] +git-tree-sha1 = "2205eff89c992bb6d21bc44feb4b26e6d20f54d4" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.49.4" +version = "6.53.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1255,10 +1255,10 @@ uuid = "d96e819e-fc66-5662-9728-84c9c7592b0a" version = "0.12.3" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1282,16 +1282,16 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" [[PoissonRandom]] deps = ["Random"] @@ -1323,17 +1323,23 @@ git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" version = "0.4.12" +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" + [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1373,9 +1379,9 @@ uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[Random123]] deps = ["Random", "RandomNumbers"] -git-tree-sha1 = "7a1a306b72cfa60634f03a911405f4e64d1b718b" +git-tree-sha1 = "552f30e847641591ba3f39fd1bed559b9deb0ef3" uuid = "74087812-796a-5b5d-8853-05524746bad3" -version = "1.6.0" +version = "1.6.1" [[RandomNumbers]] deps = ["Random", "Requires"] @@ -1390,9 +1396,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1401,22 +1407,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.38.5" [[RecursiveFactorization]] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"] @@ -1449,9 +1455,9 @@ version = "1.1.1" [[ReverseDiff]] deps = ["ChainRulesCore", "DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] -git-tree-sha1 = "afc870db2b2c2df1ba3f7b199278bb071e4f6f90" +git-tree-sha1 = "5fb7c1053046a80b53cf9c0ef8526ea656de7b8c" uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" -version = "1.14.4" +version = "1.14.6" [[Rmath]] deps = ["Random", "Rmath_jll"] @@ -1467,15 +1473,15 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" @@ -1487,33 +1493,33 @@ version = "0.1.0" [[SLEEFPirates]] deps = ["IfElse", "Static", "VectorizationBase"] -git-tree-sha1 = "cda0aece8080e992f6370491b08ef3909d1c04e7" +git-tree-sha1 = "4b8586aece42bee682399c4c4aee95446aa5cd19" uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" -version = "0.6.38" +version = "0.6.39" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "ddf57a23d610d30d0c4bd01132f4646a2a77d171" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" +version = "1.92.5" [[SciMLNLSolve]] deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"] -git-tree-sha1 = "2e1606c282fae6bd9aed4f159695774a44b9c75f" +git-tree-sha1 = "2d00015fa0a190220dc5605406b85073f6634391" uuid = "e9a6253c-8580-4d32-9898-8661bb511710" -version = "0.1.4" +version = "0.1.7" [[SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "0.2.12" [[SciMLSensitivity]] deps = ["Adapt", "ArrayInterface", "Cassette", "ChainRulesCore", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "DiffRules", "Distributions", "EllipsisNotation", "Enzyme", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "GPUArraysCore", "LinearAlgebra", "LinearSolve", "Markdown", "OrdinaryDiffEq", "Parameters", "PreallocationTools", "QuadGK", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "ReverseDiff", "SciMLBase", "SciMLOperators", "SimpleNonlinearSolve", "SparseDiffTools", "StaticArraysCore", "Statistics", "StochasticDiffEq", "Tracker", "TruncatedStacktraces", "Zygote", "ZygoteRules"] -git-tree-sha1 = "a083f968aa6538ce688cb99a498e1dea1a719d85" +git-tree-sha1 = "f69de0780d8fd73120743e0fe23dd5fc4eafe2c3" uuid = "1ed8b502-d754-442c-8d5d-10ac956f44a1" -version = "7.27.0" +version = "7.33.0" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1528,9 +1534,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1557,10 +1563,10 @@ uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" version = "1.1.0" [[SimpleNonlinearSolve]] -deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Reexport", "Requires", "SciMLBase", "SnoopPrecompile", "StaticArraysCore"] -git-tree-sha1 = "54c78ac3cc0343a16785adabe5bbf4063c737967" +deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PrecompileTools", "Reexport", "Requires", "SciMLBase", "StaticArraysCore"] +git-tree-sha1 = "7c55a3e65aad4ce6e610409cdd564b8d590b9726" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "0.1.14" +version = "0.1.15" [[SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] @@ -1593,10 +1599,10 @@ deps = ["LinearAlgebra", "Random"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[SparseDiffTools]] -deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "e19ac47477c9a8fcca06dab5e5471417d5d9d723" +deps = ["ADTypes", "Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Reexport", "Requires", "SciMLOperators", "Setfield", "SparseArrays", "StaticArrayInterface", "StaticArrays", "Tricks", "VertexSafeGraphs"] +git-tree-sha1 = "c5144590905924f1d1c6c3e82f9e5a5007459109" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.31.0" +version = "2.4.0" [[Sparspak]] deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"] @@ -1618,21 +1624,21 @@ version = "0.1.15" [[Static]] deps = ["IfElse"] -git-tree-sha1 = "08be5ee09a7632c32695d954a602df96a877bf0d" +git-tree-sha1 = "dbde6766fc677423598138a5951269432b0fcc90" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.8.6" +version = "0.8.7" [[StaticArrayInterface]] deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "Static", "SuiteSparse"] -git-tree-sha1 = "fd5f417fd7e103c121b0a0b4a6902f03991111f4" +git-tree-sha1 = "33040351d2403b84afce74dae2e22d3f5b18edcb" uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" -version = "1.3.0" +version = "1.4.0" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1651,9 +1657,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1668,28 +1674,28 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[SteadyStateDiffEq]] deps = ["DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "NLsolve", "Reexport", "SciMLBase"] -git-tree-sha1 = "04a7d0bb1c824857ba0bb0c17bc5950dccbfdd5d" +git-tree-sha1 = "564451a262696334a3bab19108a99dd90d5a22c8" uuid = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f" -version = "1.14.0" +version = "1.15.0" [[StochasticDiffEq]] -deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "073da86200349ddf4ef8bc3e3f3acd62e1d554f7" +deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] +git-tree-sha1 = "619c846726548b7b2e8728b72f288acf10390121" uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0" -version = "6.60.0" +version = "6.61.0" [[StrideArraysCore]] deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] -git-tree-sha1 = "f859ab67ca232b777a03a6cee588c1c15f7ec40a" +git-tree-sha1 = "602a8bef17c744f1de965979398597dfa50e1a2f" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.4.9" +version = "0.4.15" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1717,10 +1723,10 @@ deps = ["Artifacts", "Libdl", "OpenBLAS_jll"] uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" [[Sundials]] -deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "Sundials_jll"] -git-tree-sha1 = "a4e8491c163d74fb92905c6443e59558f5e609a4" +deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "PrecompileTools", "Reexport", "SciMLBase", "SparseArrays", "Sundials_jll"] +git-tree-sha1 = "a982ee85e1908d39f58d7fff670e60f991ca2ddb" uuid = "c3572dad-4567-51f8-b174-8c6c989267f4" -version = "4.16.0" +version = "4.19.0" [[Sundials_jll]] deps = ["CompilerSupportLibraries_jll", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"] @@ -1768,9 +1774,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1784,27 +1790,27 @@ version = "0.5.1" [[TimerOutputs]] deps = ["ExprTools", "Printf"] -git-tree-sha1 = "f2fd3f288dfc6f507b0c3a2eb3bac009251e548b" +git-tree-sha1 = "f548a9e9c490030e545f72074a41edfd0e5bcdd7" uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" -version = "0.5.22" +version = "0.5.23" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[TreeViews]] deps = ["Test"] @@ -1819,9 +1825,9 @@ uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" version = "0.1.19" [[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" +version = "0.1.7" [[TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] @@ -1858,6 +1864,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1865,9 +1894,9 @@ version = "0.1.2" [[VectorizationBase]] deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static", "StaticArrayInterface"] -git-tree-sha1 = "a07b279148653974edd945c8c8e09af156bcb46e" +git-tree-sha1 = "b182207d4af54ac64cbc71797765068fdeff475d" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.62" +version = "0.21.64" [[VertexSafeGraphs]] deps = ["Graphs"] @@ -2043,15 +2072,15 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[Zygote]] -deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "Requires", "SnoopPrecompile", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] -git-tree-sha1 = "4df8f470806a45a8630ac8f597304821dc8e8838" +deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] +git-tree-sha1 = "5be3ddb88fc992a7d8ea96c3f10a49a7e98ebc7b" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" -version = "0.6.59" +version = "0.6.62" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/11-probabilistic-pca/Manifest.toml b/tutorials/11-probabilistic-pca/Manifest.toml index 50907e792..ac8f6c2d8 100644 --- a/tutorials/11-probabilistic-pca/Manifest.toml +++ b/tutorials/11-probabilistic-pca/Manifest.toml @@ -1,5 +1,10 @@ # This file is machine-generated - editing it directly is not advised +[[ADTypes]] +git-tree-sha1 = "dcfdf328328f2645531c4ddebf841228aef74130" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.3" + [[AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" @@ -25,9 +30,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -74,14 +79,20 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -95,10 +106,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -125,6 +136,11 @@ git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" @@ -139,27 +155,27 @@ version = "0.5.1" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -168,10 +184,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -197,9 +213,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -218,9 +234,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -230,9 +252,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -245,9 +267,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataFrames]] deps = ["Compat", "DataAPI", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] @@ -266,12 +288,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -299,9 +315,9 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -314,16 +330,16 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -395,9 +411,9 @@ version = "3.3.10+0" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "589d3d3bff204bdd80ecc53293896b4f39175723" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "1.1.1" [[FixedPointNumbers]] deps = ["Statistics"] @@ -464,21 +480,21 @@ version = "3.3.8+0" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -504,10 +520,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "CodecZlib", "Dates", "IniFile", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "37e4657cd56b11abe3d10cd4a1ec5fbdb4180263" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.7.4" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -516,21 +532,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -551,9 +562,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -573,9 +584,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -611,9 +622,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -621,11 +632,17 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -639,10 +656,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -657,9 +686,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[Lazy]] deps = ["MacroTools"] @@ -762,9 +791,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -806,9 +835,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -849,15 +878,15 @@ uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -867,9 +896,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -912,15 +941,15 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "6503b77492fd7fcb9379bf73cd31035670e3c509" +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.3.3" +version = "1.4.1" [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -941,9 +970,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -956,10 +985,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -983,16 +1012,16 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" [[PooledArrays]] deps = ["DataAPI", "Future"] @@ -1000,17 +1029,23 @@ git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" version = "1.4.2" +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" + [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1055,9 +1090,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1066,22 +1101,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.38.5" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1102,9 +1137,9 @@ version = "1.3.0" [[ReverseDiff]] deps = ["ChainRulesCore", "DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] -git-tree-sha1 = "afc870db2b2c2df1ba3f7b199278bb071e4f6f90" +git-tree-sha1 = "5fb7c1053046a80b53cf9c0ef8526ea656de7b8c" uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" -version = "1.14.4" +version = "1.14.6" [[Rmath]] deps = ["Random", "Rmath_jll"] @@ -1120,30 +1155,30 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "ddf57a23d610d30d0c4bd01132f4646a2a77d171" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" +version = "1.92.5" [[SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "0.2.12" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1158,9 +1193,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1219,9 +1254,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1240,9 +1275,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1257,10 +1292,10 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1317,9 +1352,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1327,26 +1362,26 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" +version = "0.1.7" [[TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] @@ -1383,6 +1418,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1556,9 +1614,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/12-gaussian-process/Manifest.toml b/tutorials/12-gaussian-process/Manifest.toml index 795f26967..a5ee8d32e 100644 --- a/tutorials/12-gaussian-process/Manifest.toml +++ b/tutorials/12-gaussian-process/Manifest.toml @@ -1,5 +1,10 @@ # This file is machine-generated - editing it directly is not advised +[[ADTypes]] +git-tree-sha1 = "dcfdf328328f2645531c4ddebf841228aef74130" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.3" + [[AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" @@ -8,9 +13,9 @@ version = "1.3.1" [[AbstractGPs]] deps = ["ChainRulesCore", "Distributions", "FillArrays", "IrrationalConstants", "KernelFunctions", "LinearAlgebra", "PDMats", "Random", "RecipesBase", "Reexport", "Statistics", "StatsBase", "Test"] -git-tree-sha1 = "6ba5aaca86aafc4e24e56ea180761f455ec5e453" +git-tree-sha1 = "64c52bd66b5c8f777b0c34a77a471e7b864c2cba" uuid = "99985d1d-32ba-4be9-9821-2ec096f28918" -version = "0.5.14" +version = "0.5.17" [[AbstractMCMC]] deps = ["BangBang", "ConsoleProgressMonitor", "Distributed", "Logging", "LoggingExtras", "ProgressLogging", "Random", "StatsBase", "TerminalLoggers", "Transducers"] @@ -31,9 +36,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -68,14 +73,20 @@ version = "2.3.0" uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -89,10 +100,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -108,17 +119,27 @@ git-tree-sha1 = "1234b03e94938e6f2b14834dfd3ef45698d5e14f" uuid = "76274a88-744f-5084-9051-94815aaf08c4" version = "0.10.8" +[[BitFlags]] +git-tree-sha1 = "43b1a4a8f797c1cddadf60499a8a077d4af2cd2d" +uuid = "d1d4a3ce-64b1-5f1a-9ba4-7e7e69966f35" +version = "0.1.7" + [[Bzip2_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[CSV]] -deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "SentinelArrays", "SnoopPrecompile", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] -git-tree-sha1 = "c700cce799b51c9045473de751e9319bdd1c6e94" +deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "PrecompileTools", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"] +git-tree-sha1 = "44dbf560808d49041989b8a96cae4cffbeb7966a" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" -version = "0.10.9" +version = "0.10.11" [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] @@ -134,27 +155,27 @@ version = "0.5.1" [[CategoricalArrays]] deps = ["DataAPI", "Future", "Missings", "Printf", "Requires", "Statistics", "Unicode"] -git-tree-sha1 = "5084cc1a28976dd1642c9f337b28a3cb03e0f7d2" +git-tree-sha1 = "1568b28f91293458345dabba6a5ea3f183250a61" uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597" -version = "0.10.7" +version = "0.10.8" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -163,10 +184,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -192,9 +213,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -213,9 +234,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -225,9 +252,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -240,9 +267,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataFrames]] deps = ["Compat", "DataAPI", "Future", "InlineStrings", "InvertedIndices", "IteratorInterfaceExtensions", "LinearAlgebra", "Markdown", "Missings", "PooledArrays", "PrettyTables", "Printf", "REPL", "Random", "Reexport", "SentinelArrays", "SnoopPrecompile", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] @@ -288,9 +315,9 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -303,16 +330,16 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -384,9 +411,9 @@ version = "3.3.10+0" [[FileIO]] deps = ["Pkg", "Requires", "UUIDs"] -git-tree-sha1 = "7be5f99f7d15578798f338f5433b6c432ea8037b" +git-tree-sha1 = "299dc33549f68299137e51e6d49a13b5b1da9673" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" -version = "1.16.0" +version = "1.16.1" [[FilePathsBase]] deps = ["Compat", "Dates", "Mmap", "Printf", "Test", "UUIDs"] @@ -396,9 +423,9 @@ version = "0.9.20" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "589d3d3bff204bdd80ecc53293896b4f39175723" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "1.1.1" [[FixedPointNumbers]] deps = ["Statistics"] @@ -465,21 +492,21 @@ version = "3.3.8+0" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -505,10 +532,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"] -git-tree-sha1 = "c7ec02c4c6a039a98a15f955462cd7aea5df4508" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "0.8.19" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -517,21 +544,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -552,9 +574,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -574,9 +596,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -612,9 +634,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -622,17 +644,23 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[KernelFunctions]] deps = ["ChainRulesCore", "Compat", "CompositionsBase", "Distances", "FillArrays", "Functors", "IrrationalConstants", "LinearAlgebra", "LogExpFunctions", "Random", "Requires", "SpecialFunctions", "Statistics", "StatsBase", "TensorCore", "Test", "ZygoteRules"] -git-tree-sha1 = "2f7e0b873c61238dfd8516d33303ef9aeb68de5e" +git-tree-sha1 = "c6df06e59d1834ef8290eb702dfe21ad973fd29f" uuid = "ec8451be-7e33-11e9-00cf-bbf324bd1392" -version = "0.10.52" +version = "0.10.55" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -646,10 +674,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -664,9 +704,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[Lazy]] deps = ["MacroTools"] @@ -769,9 +809,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -813,9 +853,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -853,18 +893,18 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[Mocking]] deps = ["Compat", "ExprTools"] -git-tree-sha1 = "782e258e80d68a73d8c916e55f8ced1de00c2cea" +git-tree-sha1 = "4cc0c5a83933648b615c36c2b956d94fda70641e" uuid = "78c3b35d-d492-501b-9361-3d52fe80e533" -version = "0.7.6" +version = "0.7.7" [[MozillaCACerts_jll]] uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -874,9 +914,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -902,11 +942,17 @@ version = "1.3.5+1" deps = ["Artifacts", "Libdl"] uuid = "05823500-19ac-5b8b-9628-191a04bc5112" +[[OpenSSL]] +deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" +uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" +version = "1.4.1" + [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -927,9 +973,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -942,10 +988,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -969,16 +1015,16 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" [[PooledArrays]] deps = ["DataAPI", "Future"] @@ -986,17 +1032,23 @@ git-tree-sha1 = "a6062fe4063cdafe78f4a0a81cfffb89721b30e7" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" version = "1.4.2" +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" + [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1053,9 +1105,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1064,22 +1116,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.38.5" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1100,9 +1152,9 @@ version = "1.3.0" [[ReverseDiff]] deps = ["ChainRulesCore", "DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics"] -git-tree-sha1 = "afc870db2b2c2df1ba3f7b199278bb071e4f6f90" +git-tree-sha1 = "5fb7c1053046a80b53cf9c0ef8526ea656de7b8c" uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267" -version = "1.14.4" +version = "1.14.6" [[Rmath]] deps = ["Random", "Rmath_jll"] @@ -1118,30 +1170,30 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "ddf57a23d610d30d0c4bd01132f4646a2a77d171" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" +version = "1.92.5" [[SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "0.2.12" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1156,9 +1208,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1179,6 +1231,11 @@ git-tree-sha1 = "91eddf657aca81df9ae6ceb20b959ae5653ad1de" uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f" version = "1.0.3" +[[SimpleBufferStream]] +git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" +uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" +version = "1.1.0" + [[SnoopPrecompile]] deps = ["Preferences"] git-tree-sha1 = "e760a70afdcd461cf01a575947738d359234665c" @@ -1212,9 +1269,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1233,9 +1290,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1298,9 +1355,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1308,32 +1365,32 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[TimeZones]] deps = ["Dates", "Downloads", "InlineStrings", "LazyArtifacts", "Mocking", "Printf", "RecipesBase", "Scratch", "Unicode"] -git-tree-sha1 = "a92ec4466fc6e3dd704e2668b5e7f24add36d242" +git-tree-sha1 = "cdaa0c2a4449724aded839550eca7d7240bb6938" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" -version = "1.9.1" +version = "1.10.0" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" +version = "0.1.7" [[TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] @@ -1347,6 +1404,11 @@ git-tree-sha1 = "8a40377bcc4b054ebdc8f680e96cd73a4a6fe2e6" uuid = "fce5fe82-541a-59a6-adf8-730c64b5f9a0" version = "0.22.0" +[[URIs]] +git-tree-sha1 = "074f993b0ca030848b897beff716d93aca60f06a" +uuid = "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4" +version = "1.4.2" + [[UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4" @@ -1365,6 +1427,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1543,9 +1628,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/13-seasonal-time-series/Manifest.toml b/tutorials/13-seasonal-time-series/Manifest.toml index 9b06ca6c8..81a1f1e5c 100644 --- a/tutorials/13-seasonal-time-series/Manifest.toml +++ b/tutorials/13-seasonal-time-series/Manifest.toml @@ -1,5 +1,10 @@ # This file is machine-generated - editing it directly is not advised +[[ADTypes]] +git-tree-sha1 = "dcfdf328328f2645531c4ddebf841228aef74130" +uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b" +version = "0.1.3" + [[AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] git-tree-sha1 = "16b6dbc4cf7caee4e1e75c49485ec67b667098a0" @@ -25,9 +30,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -74,14 +79,20 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -95,10 +106,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -125,6 +136,11 @@ git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" @@ -139,27 +155,27 @@ version = "0.5.1" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -168,10 +184,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -197,9 +213,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -218,9 +234,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -230,9 +252,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -245,9 +267,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -260,12 +282,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -293,9 +309,9 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -308,16 +324,16 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -389,9 +405,9 @@ version = "3.3.10+0" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "589d3d3bff204bdd80ecc53293896b4f39175723" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "1.1.1" [[FixedPointNumbers]] deps = ["Statistics"] @@ -458,21 +474,21 @@ version = "3.3.8+0" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -498,10 +514,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "CodecZlib", "Dates", "IniFile", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "37e4657cd56b11abe3d10cd4a1ec5fbdb4180263" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.7.4" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -510,21 +526,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -539,9 +550,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -561,9 +572,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -599,9 +610,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -609,11 +620,17 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -627,10 +644,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -645,9 +674,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[Lazy]] deps = ["MacroTools"] @@ -750,9 +779,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -794,9 +823,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -837,15 +866,15 @@ uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -855,9 +884,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -900,15 +929,15 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "6503b77492fd7fcb9379bf73cd31035670e3c509" +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.3.3" +version = "1.4.1" [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -929,9 +958,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -944,10 +973,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -971,28 +1000,34 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" + +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1037,9 +1072,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1048,22 +1083,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.38.5" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1096,30 +1131,30 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ADTypes", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "ddf57a23d610d30d0c4bd01132f4646a2a77d171" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" +version = "1.92.5" [[SciMLOperators]] deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" +git-tree-sha1 = "6a657a73322170eec86fb427661dbee079b85bff" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "0.2.12" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1134,9 +1169,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1162,12 +1197,6 @@ git-tree-sha1 = "874e8867b33a00e784c8a7e4b60afe9e037b74e1" uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" version = "1.1.0" -[[SnoopPrecompile]] -deps = ["Preferences"] -git-tree-sha1 = "e760a70afdcd461cf01a575947738d359234665c" -uuid = "66db9d55-30c0-4569-8b51-7e840670fc0c" -version = "1.0.3" - [[Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc" @@ -1195,9 +1224,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1216,9 +1245,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1233,10 +1262,10 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1293,9 +1322,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1303,26 +1332,26 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" +version = "0.1.7" [[TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] @@ -1359,6 +1388,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1532,9 +1584,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"] diff --git a/tutorials/14-minituring/Manifest.toml b/tutorials/14-minituring/Manifest.toml index 70577a848..9eaf83fc7 100644 --- a/tutorials/14-minituring/Manifest.toml +++ b/tutorials/14-minituring/Manifest.toml @@ -8,9 +8,9 @@ version = "1.3.1" [[AbstractMCMC]] deps = ["BangBang", "ConsoleProgressMonitor", "Distributed", "LogDensityProblems", "Logging", "LoggingExtras", "ProgressLogging", "Random", "StatsBase", "TerminalLoggers", "Transducers"] -git-tree-sha1 = "323799cab36200a01f5e9da3fecbd58329e2dd27" +git-tree-sha1 = "a21654aa796bcc993284dace0d17d1022774c0a3" uuid = "80f14c24-f653-4e6a-9b94-39d6b0f70001" -version = "4.4.0" +version = "4.4.1" [[AbstractPPL]] deps = ["AbstractMCMC", "DensityInterface", "Random", "Setfield", "SparseArrays"] @@ -25,9 +25,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -62,10 +62,10 @@ version = "2.3.0" uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" [[ArrayInterfaceCore]] deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] @@ -82,6 +82,12 @@ version = "0.1.4" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -95,10 +101,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -114,6 +120,11 @@ git-tree-sha1 = "1234b03e94938e6f2b14834dfd3ef45698d5e14f" uuid = "76274a88-744f-5084-9051-94815aaf08c4" version = "0.10.8" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[Calculus]] deps = ["LinearAlgebra"] git-tree-sha1 = "f641eb0a4f00c343bbc32346e1217b86f3ce9dad" @@ -122,21 +133,21 @@ version = "0.5.1" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Combinatorics]] git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860" @@ -144,9 +155,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -165,9 +176,9 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -177,9 +188,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Crayons]] git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" @@ -187,9 +198,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -229,25 +240,25 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distributed]] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] @@ -301,9 +312,9 @@ version = "3.3.10+0" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "deed294cde3de20ae0b2e0355a6c4e1c6a5ceffc" +git-tree-sha1 = "7072f1e3e5a8be51d525d64f63d3ec1287ff2790" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.12.8" +version = "0.13.11" [[Formatting]] deps = ["Printf"] @@ -340,21 +351,21 @@ uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -369,9 +380,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -391,9 +402,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -421,16 +432,34 @@ git-tree-sha1 = "abc9885a7ca2052a736a600f7fa66209f96506e1" uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210" version = "1.4.1" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" + +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LaTeXStrings]] git-tree-sha1 = "f2355693d6778a178ade15952b7ac47a4ff97996" @@ -484,9 +513,9 @@ version = "2.1.1" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -528,9 +557,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -559,10 +588,10 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -572,9 +601,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -607,9 +636,9 @@ uuid = "3bd65402-5787-11e9-1adc-39752487f4e2" version = "0.2.15" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PDMats]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] @@ -621,17 +650,23 @@ version = "0.11.17" deps = ["Artifacts", "Dates", "Downloads", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"] uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f" +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" + [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -670,9 +705,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -681,10 +716,10 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecursiveArrayTools]] deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] @@ -717,15 +752,15 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" @@ -787,9 +822,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -808,9 +843,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -861,9 +896,9 @@ uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -871,15 +906,15 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[Turing]] deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "DiffResults", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker", "ZygoteRules"] @@ -899,6 +934,17 @@ version = "1.0.2" [[Unicode]] uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5" +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[WoodburyMatrices]] deps = ["LinearAlgebra", "SparseArrays"] git-tree-sha1 = "de67fa59e33ad156a590055375a30b23c40299d3" diff --git a/tutorials/docs-00-getting-started/Manifest.toml b/tutorials/docs-00-getting-started/Manifest.toml index 9b06ca6c8..73f3a407f 100644 --- a/tutorials/docs-00-getting-started/Manifest.toml +++ b/tutorials/docs-00-getting-started/Manifest.toml @@ -25,9 +25,9 @@ version = "0.4.4" [[Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "ProgressMeter", "Random", "Requires", "Setfield", "Statistics", "StatsBase", "StatsFuns", "UnPack"] @@ -74,14 +74,32 @@ uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3" [[ArrayInterface]] -deps = ["Adapt", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] -git-tree-sha1 = "af2fd6a5d299078a6d7827ce3356b68d2de5470b" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "d3f758863a47ceef2248d136657cb9c033603641" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "7.3.1" +version = "7.4.8" + +[[ArrayInterfaceCore]] +deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "e5f08b5689b1aad068e01751889f2f615c7db36d" +uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" +version = "0.1.29" + +[[ArrayInterfaceStaticArraysCore]] +deps = ["ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] +git-tree-sha1 = "01a9f8e6cfc2bfdd01d333f70b8014a04893103c" +uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" +version = "0.1.4" [[Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -95,10 +113,10 @@ uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9" version = "0.4.6" [[BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "e28912ce94077686443433c2800104b061a827ed" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.39" [[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -125,6 +143,11 @@ git-tree-sha1 = "19a35467a82e236ff51bc17a3a44b69ef35185a2" uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0" version = "1.0.8+0" +[[CEnum]] +git-tree-sha1 = "eb4cb44a499229b3b8426dcfb5dd85333951ff90" +uuid = "fa961155-64e5-5f13-b03f-caf6b980ea82" +version = "0.4.2" + [[Cairo_jll]] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] git-tree-sha1 = "4b859a208b2397a7a623a03449e4636bdb17bcf2" @@ -139,27 +162,27 @@ version = "0.5.1" [[ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "82e2d776be8bef478792d6cba65b06b16952f8ba" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.50.0" [[ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase"] -git-tree-sha1 = "7ebbd653f74504447f1c33b91cd706a69a1b189f" +git-tree-sha1 = "a6e6ce44a1e0a781772fc795fb7343b1925e9898" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" -version = "0.14.4" +version = "0.15.2" [[CodecZlib]] deps = ["TranscodingStreams", "Zlib_jll"] @@ -168,10 +191,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -197,9 +220,9 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[CommonSolve]] -git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" +git-tree-sha1 = "0eee5eb66b1cf62cd6ad1b460238e60e4b09400c" uuid = "38540f10-b2f7-11e9-35d8-d573e4eb0ff2" -version = "0.2.3" +version = "0.2.4" [[CommonSubexpressions]] deps = ["MacroTools", "Test"] @@ -218,9 +241,15 @@ deps = ["Artifacts", "Libdl"] uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" [[CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -230,9 +259,9 @@ version = "0.1.2" [[ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -245,9 +274,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -260,12 +289,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0" -[[DataValues]] -deps = ["DataValueInterfaces", "Dates"] -git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" -uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" -version = "0.4.13" - [[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" @@ -293,9 +316,9 @@ version = "1.1.0" [[DiffRules]] deps = ["IrrationalConstants", "LogExpFunctions", "NaNMath", "Random", "SpecialFunctions"] -git-tree-sha1 = "a4ad7ef19d2cdc2eff57abbbe68032b1cd0bd8f8" +git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" -version = "1.13.0" +version = "1.15.1" [[Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -308,22 +331,22 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "c72970914c8a21b36bbc244e9df0ed1834a0360b" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.95" [[DistributionsAD]] -deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "Distributions", "FillArrays", "LinearAlgebra", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsFuns", "ZygoteRules"] +git-tree-sha1 = "c19c3ee030a0abb9366e6d3c5eafff519471f645" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.47" [[DocStringExtensions]] deps = ["LibGit2"] -git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d" +git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b" uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae" -version = "0.9.3" +version = "0.8.6" [[Downloads]] deps = ["ArgTools", "LibCURL", "NetworkOptions"] @@ -389,9 +412,9 @@ version = "3.3.10+0" [[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "7072f1e3e5a8be51d525d64f63d3ec1287ff2790" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "0.13.11" [[FixedPointNumbers]] deps = ["Statistics"] @@ -458,21 +481,21 @@ version = "3.3.8+0" [[GPUArraysCore]] deps = ["Adapt"] -git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" +git-tree-sha1 = "2d6ca471a6c7b536127afccfa7564b5b39227fe0" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" -version = "0.1.4" +version = "0.1.5" [[GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "8b8a2fd4536ece6e554168c21860b6820a8a83db" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.7" [[GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "19fad9cd9ae44847fe842558a744748084a722d1" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.7+0" [[Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -498,10 +521,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[HTTP]] -deps = ["Base64", "CodecZlib", "Dates", "IniFile", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "37e4657cd56b11abe3d10cd4a1ec5fbdb4180263" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "5e77dbf117412d4f164a464d610ee6050cc75272" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.7.4" +version = "1.9.6" [[HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -510,21 +533,16 @@ uuid = "2e76f6c2-a576-52d4-95c1-20adfe4de566" version = "2.8.1+1" [[HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "0ec02c648befc2f94156eaef13b0f38106212f3f" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.17" [[IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" - -[[IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "0.4.10" [[InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -539,9 +557,9 @@ version = "0.3.0" [[IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[InteractiveUtils]] deps = ["Markdown"] @@ -561,9 +579,9 @@ version = "0.7.4" [[InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" @@ -599,9 +617,9 @@ version = "1.4.1" [[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[JpegTurbo_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] @@ -609,11 +627,17 @@ git-tree-sha1 = "6f2675ef130a300a112286de91973805fcc5ffbc" uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" +[[KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[LAME_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -627,10 +651,22 @@ git-tree-sha1 = "bf36f528eec6634efc60d7ec062008f171071434" uuid = "88015f11-f218-50d7-93a8-a6af411a945d" version = "3.0.0+1" +[[LLVM]] +deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] +git-tree-sha1 = "5007c1421563108110bbd57f63d8ad4565808818" +uuid = "929cbde3-209d-540e-8aea-75f648917ca0" +version = "5.2.0" + +[[LLVMExtra_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "1222116d7313cdefecf3d45a2bc1a89c4e7c9217" +uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" +version = "0.0.22+0" + [[LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -645,15 +681,9 @@ version = "1.3.0" [[Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" - -[[Lazy]] -deps = ["MacroTools"] -git-tree-sha1 = "1370f8202dac30758f3c345f9909b97f53d87d3f" -uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0" -version = "0.15.1" +version = "0.16.0" [[LazyArtifacts]] deps = ["Artifacts", "Pkg"] @@ -750,9 +780,9 @@ version = "1.0.3" [[LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] -git-tree-sha1 = "0a1b7c2863e44523180fdb3146534e265a91870b" +git-tree-sha1 = "c3ce8e7420b3a6e071e0fe4745f5d4300e37b13f" uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688" -version = "0.3.23" +version = "0.3.24" [[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" @@ -794,9 +824,9 @@ uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.10" [[MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[Markdown]] deps = ["Base64"] @@ -837,15 +867,15 @@ uuid = "14a3606d-f60d-562e-9121-12d972cd8159" [[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "91a48569383df24f0fd2baf789df2aade3d0ad80" +git-tree-sha1 = "68bf5103e002c44adfd71fea6bd770b3f0586843" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.1" +version = "0.10.2" [[NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[NaNMath]] deps = ["OpenLibm_jll"] @@ -855,9 +885,9 @@ version = "1.0.2" [[NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -900,15 +930,15 @@ uuid = "05823500-19ac-5b8b-9628-191a04bc5112" [[OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "6503b77492fd7fcb9379bf73cd31035670e3c509" +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.3.3" +version = "1.4.1" [[OpenSSL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9ff31d101d987eb9d66bd8b176ac7c277beccd09" +deps = ["Artifacts", "JLLWrappers", "Libdl"] +git-tree-sha1 = "1aa4b74f80b01c6bc2b89992b861b5f210e665b5" uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95" -version = "1.1.20+0" +version = "1.1.21+0" [[OpenSpecFun_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] @@ -929,9 +959,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -944,10 +974,10 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.17" [[Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.10" [[Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -971,28 +1001,34 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "UnitfulLatexify", "Unzip"] +git-tree-sha1 = "ceb1ec8d4fbeb02f8817004837d924583707951b" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.15" + +[[PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "9673d39decc5feece56ef3940e5dafba15ba0f81" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.2" [[Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[Printf]] deps = ["Unicode"] @@ -1037,9 +1073,9 @@ version = "0.3.2" [[Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "1342a47bf3260ee108163042310d26f2be5ec90b" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.5" [[RealDot]] deps = ["LinearAlgebra"] @@ -1048,22 +1084,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterface", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "3dcb2a98436389c0aac964428a5fa099118944de" +deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "StaticArraysCore", "Statistics", "Tables", "ZygoteRules"] +git-tree-sha1 = "a5ce741acddc02f0d4fc6505463ca89697d7fb23" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.38.0" +version = "2.32.3" [[Reexport]] git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b" @@ -1096,30 +1132,24 @@ version = "0.4.0+0" [[Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "de432823e8aab4dd1a985be4be768f95acf152d4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.17" [[RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "237edc1563bbf078629b4f8d194bd334e97907cf" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.11" [[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" [[SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ArrayInterfaceCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "RuntimeGeneratedFunctions", "StaticArraysCore", "Statistics", "Tables"] +git-tree-sha1 = "fe89a8113ea445bcff9ee570077830674babb534" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" - -[[SciMLOperators]] -deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "e61e48ef909375203092a6e83508c8416df55a83" -uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.2.0" +version = "1.81.0" [[ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1134,9 +1164,9 @@ version = "1.2.0" [[SentinelArrays]] deps = ["Dates", "Random"] -git-tree-sha1 = "77d3c4726515dca71f6d80fbb5e251088defe305" +git-tree-sha1 = "04bdff0b09c65ff3e06a05e3eb7b120223da3d39" uuid = "91c51154-3ec4-41a3-a24f-3f23e20d615c" -version = "1.3.18" +version = "1.4.0" [[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b" @@ -1195,9 +1225,9 @@ version = "0.1.15" [[StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1216,9 +1246,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -1233,10 +1263,10 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[StatsPlots]] -deps = ["AbstractFFTs", "Clustering", "DataStructures", "DataValues", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] -git-tree-sha1 = "e0d5bc26226ab1b7648278169858adcfbd861780" +deps = ["AbstractFFTs", "Clustering", "DataStructures", "Distributions", "Interpolations", "KernelDensity", "LinearAlgebra", "MultivariateStats", "NaNMath", "Observables", "Plots", "RecipesBase", "RecipesPipeline", "Reexport", "StatsBase", "TableOperations", "Tables", "Widgets"] +git-tree-sha1 = "14ef622cf28b05e38f8af1de57bc9142b03fbfe3" uuid = "f3b207a7-027a-5e70-b257-86293d7955fd" -version = "0.15.4" +version = "0.15.5" [[StringManipulation]] git-tree-sha1 = "46da2434b41f41ac3594ee9816ce5541c6096123" @@ -1253,12 +1283,6 @@ version = "0.6.15" deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9" -[[SymbolicIndexingInterface]] -deps = ["DocStringExtensions"] -git-tree-sha1 = "f8ab052bfcbdb9b48fad2c80c873aa0d0344dfe5" -uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5" -version = "0.2.2" - [[TOML]] deps = ["Dates"] uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76" @@ -1293,9 +1317,9 @@ version = "0.1.1" [[TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -1303,32 +1327,21 @@ uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40" [[Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" - -[[Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" -uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" - -[[TruncatedStacktraces]] -deps = ["InteractiveUtils", "MacroTools", "Preferences"] -git-tree-sha1 = "7bc1632a4eafbe9bd94cf1a784a9a4eb5e040a91" -uuid = "781d530d-4396-4725-bb49-402e4bee1e77" -version = "1.3.0" +version = "0.4.76" [[Turing]] deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "Setfield", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker"] @@ -1359,6 +1372,29 @@ git-tree-sha1 = "53915e50200959667e78a92a418594b428dffddf" uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1" version = "0.4.1" +[[Unitful]] +deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" +uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" +version = "1.14.0" + +[[UnitfulLatexify]] +deps = ["LaTeXStrings", "Latexify", "Unitful"] +git-tree-sha1 = "e2d817cc500e960fdbafcf988ac8436ba3208bfd" +uuid = "45397f5d-5981-4c77-b2b3-fc36d6e9b728" +version = "1.6.3" + +[[UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[Unzip]] git-tree-sha1 = "34db80951901073501137bdbc3d5a8e7bbd06670" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" @@ -1532,9 +1568,9 @@ uuid = "83775a58-1f1d-513f-b197-d71354ab007a" [[Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"]