From e18554328202789c647af394f39e3420cf57c74b Mon Sep 17 00:00:00 2001 From: pat-alt Date: Tue, 23 Jul 2024 09:47:00 +0200 Subject: [PATCH] removed TaijaPLotting --- Project.toml | 2 +- docs/Manifest.toml | 138 +++++++-------------------------------------- docs/Project.toml | 1 - 3 files changed, 22 insertions(+), 119 deletions(-) diff --git a/Project.toml b/Project.toml index 420d1f8..1b50bb8 100644 --- a/Project.toml +++ b/Project.toml @@ -30,7 +30,7 @@ ComputationalResources = "0.3.2" Distributions = "0.25.109" Flux = "0.12, 0.13, 0.14" LinearAlgebra = "1.7, 1.10" -MLJBase = ">=0.4, 1" +MLJBase = "1" MLJFlux = "0.5" MLJModelInterface = "1.8.0" MLUtils = "0.4" diff --git a/docs/Manifest.toml b/docs/Manifest.toml index 00f2465..25d7d67 100644 --- a/docs/Manifest.toml +++ b/docs/Manifest.toml @@ -2,7 +2,7 @@ julia_version = "1.10.4" manifest_format = "2.0" -project_hash = "3a38b320d6e28531e4489912be325157cb3ab4b9" +project_hash = "07bab9fa5d046478b21247a44464171c6b19ad4c" [[deps.ANSIColoredPrinters]] git-tree-sha1 = "574baf8110975760d391c710b6341da1afa48d8c" @@ -71,18 +71,6 @@ version = "2.3.0" uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f" version = "1.1.1" -[[deps.Arpack]] -deps = ["Arpack_jll", "Libdl", "LinearAlgebra", "Logging"] -git-tree-sha1 = "9b9b347613394885fd1c8c7729bfc60528faa436" -uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97" -version = "0.5.4" - -[[deps.Arpack_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "OpenBLAS_jll", "Pkg"] -git-tree-sha1 = "5ba6c757e8feccf03a1554dfaf3e26b3cfc7fd5e" -uuid = "68821587-b530-5797-8361-c406ea357684" -version = "3.5.1+1" - [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" @@ -328,12 +316,6 @@ git-tree-sha1 = "ea32b83ca4fefa1768dc84e504cc0a94fb1ab8d1" uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" version = "2.4.2" -[[deps.ConformalPrediction]] -deps = ["CategoricalArrays", "MLJBase", "MLJModelInterface", "NaturalSort", "Plots", "Statistics"] -git-tree-sha1 = "520277c269dd9169fb5ae4b6eff45eeae46d4900" -uuid = "98bfc277-1877-43dc-819b-a3e38c30242f" -version = "0.1.5" - [[deps.ConstructionBase]] deps = ["LinearAlgebra"] git-tree-sha1 = "d8a9c0b6ac2d9081bf76324b39c78ca3ce4f0c98" @@ -359,22 +341,6 @@ git-tree-sha1 = "439e35b0b36e2e5881738abc8857bd92ad6ff9a8" uuid = "d38c429a-6771-53c6-b99e-75d170b6e991" version = "0.6.3" -[[deps.CounterfactualExplanations]] -deps = ["CategoricalArrays", "ChainRulesCore", "DataFrames", "Distributions", "Flux", "LazyArtifacts", "LinearAlgebra", "Logging", "MLJBase", "MLJDecisionTreeInterface", "MLUtils", "MultivariateStats", "PackageExtensionCompat", "ProgressMeter", "Random", "Serialization", "Statistics", "StatsBase", "Tables", "TaijaBase", "UUIDs"] -git-tree-sha1 = "8a68385b6852e9357889aea661536059bc8b6158" -uuid = "2f13d31b-18db-44c1-bc43-ebaf2cff0be0" -version = "1.1.6" - - [deps.CounterfactualExplanations.extensions] - DecisionTreeExt = "DecisionTree" - LaplaceReduxExt = "LaplaceRedux" - NeuroTreeExt = "NeuroTreeModels" - - [deps.CounterfactualExplanations.weakdeps] - DecisionTree = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb" - LaplaceRedux = "c52c1a26-f7c5-402b-80be-ba1e638ad478" - NeuroTreeModels = "1db4e0a5-a364-4b0c-897c-2bd5a4a3a1f2" - [[deps.Crayons]] git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15" uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" @@ -406,12 +372,6 @@ version = "1.0.0" deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a" -[[deps.DecisionTree]] -deps = ["AbstractTrees", "DelimitedFiles", "LinearAlgebra", "Random", "ScikitLearnBase", "Statistics"] -git-tree-sha1 = "526ca14aaaf2d5a0e242f3a8a7966eb9065d7d78" -uuid = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb" -version = "0.12.4" - [[deps.DefineSingletons]] git-tree-sha1 = "0fba8b706d0178b4dc7fd44a96a92382c9065c2c" uuid = "244e2a9f-e319-4986-a169-4d1fe445cd52" @@ -435,17 +395,6 @@ git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272" uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" version = "1.15.1" -[[deps.Distances]] -deps = ["LinearAlgebra", "Statistics", "StatsAPI"] -git-tree-sha1 = "66c4c81f259586e8f002eacebc177e1fb06363b0" -uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" -version = "0.10.11" -weakdeps = ["ChainRulesCore", "SparseArrays"] - - [deps.Distances.extensions] - DistancesChainRulesCoreExt = "ChainRulesCore" - DistancesSparseArraysExt = "SparseArrays" - [[deps.Distributed]] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" @@ -911,6 +860,12 @@ version = "1.2.2" deps = ["Artifacts", "Pkg"] uuid = "4af54fe1-eca0-43a8-85a7-787d91b784e3" +[[deps.LearnAPI]] +deps = ["InteractiveUtils", "Statistics"] +git-tree-sha1 = "ec695822c1faaaa64cee32d0b21505e1977b4809" +uuid = "92ad9a40-7767-427a-9ee6-6e577f1266cb" +version = "0.1.0" + [[deps.LibCURL]] deps = ["LibCURL_jll", "MozillaCACerts_jll"] uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21" @@ -1015,27 +970,17 @@ git-tree-sha1 = "c1dd6d7978c12545b4179fb6153b9250c96b0075" uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" version = "1.0.3" -[[deps.LossFunctions]] -deps = ["Markdown", "Requires", "Statistics"] -git-tree-sha1 = "df9da07efb9b05ca7ef701acec891ee8f73c99e2" -uuid = "30fc2ffe-d236-52d8-8643-a9d8f7c094a7" -version = "0.11.1" -weakdeps = ["CategoricalArrays"] - - [deps.LossFunctions.extensions] - LossFunctionsCategoricalArraysExt = "CategoricalArrays" - [[deps.MLJBase]] -deps = ["CategoricalArrays", "CategoricalDistributions", "ComputationalResources", "Dates", "DelimitedFiles", "Distributed", "Distributions", "InteractiveUtils", "InvertedIndices", "LinearAlgebra", "LossFunctions", "MLJModelInterface", "Missings", "OrderedCollections", "Parameters", "PrettyTables", "ProgressMeter", "Random", "ScientificTypes", "Serialization", "StatisticalTraits", "Statistics", "StatsBase", "Tables"] -git-tree-sha1 = "0b7307d1a7214ec3c0ba305571e713f9492ea984" +deps = ["CategoricalArrays", "CategoricalDistributions", "ComputationalResources", "Dates", "DelimitedFiles", "Distributed", "Distributions", "InteractiveUtils", "InvertedIndices", "LearnAPI", "LinearAlgebra", "MLJModelInterface", "Missings", "OrderedCollections", "Parameters", "PrettyTables", "ProgressMeter", "Random", "RecipesBase", "Reexport", "ScientificTypes", "Serialization", "StatisticalMeasuresBase", "StatisticalTraits", "Statistics", "StatsBase", "Tables"] +git-tree-sha1 = "6f45e12073bc2f2e73ed0473391db38c31e879c9" uuid = "a7f614a8-145f-11e9-1d2a-a57a1082229d" -version = "0.21.14" +version = "1.7.0" -[[deps.MLJDecisionTreeInterface]] -deps = ["CategoricalArrays", "DecisionTree", "MLJModelInterface", "Random", "Tables"] -git-tree-sha1 = "90ef4d3b6cacec631c57cc034e1e61b4aa0ce511" -uuid = "c6f25543-311c-4c74-83dc-3ea6d1015661" -version = "0.4.2" + [deps.MLJBase.extensions] + DefaultMeasuresExt = "StatisticalMeasures" + + [deps.MLJBase.weakdeps] + StatisticalMeasures = "a19d573c-0a75-4610-95b3-7071388c7541" [[deps.MLJFlux]] deps = ["CategoricalArrays", "ColorTypes", "ComputationalResources", "Flux", "MLJModelInterface", "Metalhead", "Optimisers", "ProgressMeter", "Random", "Statistics", "Tables"] @@ -1127,12 +1072,6 @@ version = "0.7.8" uuid = "14a3606d-f60d-562e-9121-12d972cd8159" version = "2023.1.10" -[[deps.MultivariateStats]] -deps = ["Arpack", "Distributions", "LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI", "StatsBase"] -git-tree-sha1 = "816620e3aac93e5b5359e4fdaf23ca4525b00ddf" -uuid = "6f286f6a-111f-5878-ab1e-185364afe411" -version = "0.10.3" - [[deps.NNlib]] deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] git-tree-sha1 = "190dcada8cf9520198058c4544862b1f88c6c577" @@ -1177,23 +1116,6 @@ git-tree-sha1 = "1a0fa0e9613f46c9b8c11eee38ebb4f590013c5e" uuid = "71a1bf82-56d0-4bbc-8a3c-48b961074391" version = "0.1.5" -[[deps.NaturalSort]] -git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" -uuid = "c020b1a1-e9b0-503a-9c33-f039bfc54a85" -version = "1.0.0" - -[[deps.NearestNeighborModels]] -deps = ["Distances", "FillArrays", "InteractiveUtils", "LinearAlgebra", "MLJModelInterface", "NearestNeighbors", "Statistics", "StatsBase", "Tables"] -git-tree-sha1 = "e411143a8362926e4284a54e745972e939fbab78" -uuid = "636a865e-7cf4-491e-846c-de09b730eb36" -version = "0.2.3" - -[[deps.NearestNeighbors]] -deps = ["Distances", "StaticArrays"] -git-tree-sha1 = "91a67b4d73842da90b526011fa85c5c4c9343fe0" -uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce" -version = "0.4.18" - [[deps.NetworkOptions]] uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" @@ -1266,12 +1188,6 @@ git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.11.31" -[[deps.PackageExtensionCompat]] -git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518" -uuid = "65ce6f38-6b18-4e1d-a461-8949797d7930" -version = "1.0.2" -weakdeps = ["Requires", "TOML"] - [[deps.Parameters]] deps = ["OrderedCollections", "UnPack"] git-tree-sha1 = "34c0e9ad262e5f7fc75b10a9952ca7692cfc5fbe" @@ -1518,12 +1434,6 @@ git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" uuid = "30f210dd-8aff-4c5f-94ba-8e64358c1161" version = "3.0.0" -[[deps.ScikitLearnBase]] -deps = ["LinearAlgebra", "Random", "Statistics"] -git-tree-sha1 = "7877e55c1523a4b336b433da39c8e8c08d2f221f" -uuid = "6e75b9c4-186b-50bd-896f-2d2496a4843e" -version = "0.5.0" - [[deps.Scratch]] deps = ["Dates"] git-tree-sha1 = "3bac05bc7e74a75fd9cba4295cde4045d9fe2386" @@ -1619,6 +1529,12 @@ git-tree-sha1 = "192954ef1208c7019899fbf8049e717f92959682" uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c" version = "1.4.3" +[[deps.StatisticalMeasuresBase]] +deps = ["CategoricalArrays", "InteractiveUtils", "MLUtils", "MacroTools", "OrderedCollections", "PrecompileTools", "ScientificTypesBase", "Statistics"] +git-tree-sha1 = "17dfb22e2e4ccc9cd59b487dce52883e0151b4d3" +uuid = "c062fc1d-0d66-479b-b6ac-8b44719de4cc" +version = "0.1.1" + [[deps.StatisticalTraits]] deps = ["ScientificTypesBase"] git-tree-sha1 = "542d979f6e756f13f862aa00b224f04f9e445f11" @@ -1704,18 +1620,6 @@ git-tree-sha1 = "598cd7c1f68d1e205689b1c2fe65a9f85846f297" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" version = "1.12.0" -[[deps.TaijaBase]] -deps = ["CategoricalArrays", "Distributions", "Flux", "MLUtils", "Optimisers", "StatsBase", "Tables"] -git-tree-sha1 = "1c80c4472c6ab6e8c9fa544a22d907295b388dd0" -uuid = "10284c91-9f28-4c9a-abbf-ee43576dfff6" -version = "1.2.2" - -[[deps.TaijaPlotting]] -deps = ["CategoricalArrays", "ConformalPrediction", "CounterfactualExplanations", "DataAPI", "Distributions", "Flux", "LaplaceRedux", "LinearAlgebra", "MLJBase", "MLUtils", "MultivariateStats", "NaturalSort", "NearestNeighborModels", "Plots"] -git-tree-sha1 = "2a4fcdf2abd5533d6d24a97ce5e89327391b2dc1" -uuid = "bd7198b4-c7d6-400c-9bab-9a24614b0240" -version = "1.1.2" - [[deps.Tar]] deps = ["ArgTools", "SHA"] uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e" diff --git a/docs/Project.toml b/docs/Project.toml index b3335de..ac46955 100644 --- a/docs/Project.toml +++ b/docs/Project.toml @@ -12,7 +12,6 @@ Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" Tables = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" -TaijaPlotting = "bd7198b4-c7d6-400c-9bab-9a24614b0240" Trapz = "592b5752-818d-11e9-1e9a-2b8ca4a44cd1" Zygote = "e88e6eb3-aa80-5325-afca-941959d7151f" cuDNN = "02a925ec-e4fe-4b08-9a7e-0d78e3d38ccd"