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Overall Ranking > Software > R

Updated: 2024-09-21   /   Tips:English projects refer to those with documents in English, usually displayed in the readme / wiki / official website.

# Repository Description Stars Updated
1 tidyverse/ggplot2 An implementation of the Grammar of Graphics in R 6472 2024-09-16
2 cxli233/FriendsDontLetFriends Friends don't let friends make certain types of data visualization - What are they and why are they bad. 6312 2024-07-11
3 rstudio/shiny Easy interactive web applications with R 5354 2024-09-20
4 tidyverse/dplyr dplyr: A grammar of data manipulation 4748 2024-08-27
5 Rdatatable/data.table R's data.table package extends data.frame: 3579 2024-09-20
6 rstudio/rmarkdown Dynamic Documents for R 2863 2024-09-13
7 plotly/plotly.R An interactive graphing library for R 2544 2024-09-20
8 thomasp85/patchwork The Composer of ggplots 2454 2024-09-16
9 r-lib/devtools Tools to make an R developer's life easier 2393 2024-09-20
10 yihui/knitr A general-purpose tool for dynamic report generation in R 2378 2024-09-20
11 satijalab/seurat R toolkit for single cell genomics 2252 2024-09-19
12 tylermorganwall/rayshader R Package for 2D and 3D mapping and data visualization 2051 2024-07-27
13 rstudio/gt Easily generate information-rich, publication-quality tables from R 2007 2024-09-18
14 toddwschneider/nyc-taxi-data Import public NYC taxi and for-hire vehicle (Uber, Lyft) trip data into a PostgreSQL or ClickHouse database 1989 2024-04-01
15 IndrajeetPatil/ggstatsplot Enhancing {ggplot2} plots with statistical analysis 📊📣 1979 2024-09-03
16 karthik/wesanderson A Wes Anderson color palette for R 1917 2024-06-13
17 dreamRs/esquisse RStudio add-in to make plots interactively with ggplot2 1772 2024-09-18
18 rstudio/blogdown Create Blogs and Websites with R Markdown 1728 2024-09-16
19 rich-iannone/DiagrammeR Graph and network visualization using tabular data in R 1695 2024-08-13
20 rstudio/reticulate R Interface to Python 1668 2024-09-20
21 tidyverse/tidyverse Easily install and load packages from the tidyverse 1652 2024-06-21
22 mlr-org/mlr Machine Learning in R 1643 2024-08-12
23 topepo/caret caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models 1609 2024-05-10
24 tidyverse/rvest Simple web scraping for R 1488 2024-07-16
25 tidymodels/broom Convert statistical analysis objects from R into tidy format 1445 2024-07-22
26 rstudio/plumber Turn your R code into a web API. 1391 2024-09-04
27 sfirke/janitor simple tools for data cleaning in R 1381 2024-09-12
28 tidyverse/tidyr Tidy Messy Data 1376 2024-08-28
29 ropensci/drake An R-focused pipeline toolkit for reproducibility and high-performance computing 1340 2024-07-18
30 r-spatial/sf Simple Features for R 1330 2024-09-17
31 rstudio/tensorflow TensorFlow for R 1327 2024-06-19
32 paul-buerkner/brms brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan 1268 2024-09-20
33 tidyverse/purrr A functional programming toolkit for R 1266 2024-08-21
34 mitchelloharawild/vitae R Markdown Résumés and CVs 1219 2024-07-10
35 slowkow/ggrepel 📍 Repel overlapping text labels away from each other in your ggplot2 figures. 1210 2024-09-09
36 daattali/advanced-shiny 🤹 Shiny tips & tricks for improving your apps and solving common problems 1198 2024-08-18
37 r-lib/lintr Static Code Analysis for R 1190 2024-09-17
38 juliasilge/tidytext Text mining using tidy tools ✨📄✨ 1182 2024-04-10
39 wch/r-source Read-only mirror of R source code from https://svn.r-project.org/R/, updated hourly. See the build instructions on the wiki page. 1132 2024-09-20
40 kassambara/ggpubr 'ggplot2' Based Publication Ready Plots 1119 2024-06-19
41 robjhyndman/forecast Forecasting Functions for Time Series and Linear Models 1114 2024-08-30
42 easystats/easystats 🌌 The R easystats-project 1080 2024-09-12
43 ddsjoberg/gtsummary Presentation-Ready Data Summary and Analytic Result Tables 1038 2024-09-20
44 stan-dev/rstan RStan, the R interface to Stan 1031 2024-08-28
45 tidyverse/readr Read flat files (csv, tsv, fwf) into R 1006 2024-07-31
46 easystats/performance 💪 Models' quality and performance metrics (R2, ICC, LOO, AIC, BF, ...) 1004 2024-09-18
47 YuLab-SMU/clusterProfiler 📊 A universal enrichment tool for interpreting omics data 1004 2024-08-26
48 rstudio/renv renv: Project environments for R. 999 2024-09-20
49 rstudio/tinytex A lightweight, cross-platform, portable, and easy-to-maintain LaTeX distribution based on TeX Live 978 2024-09-15
50 HenrikBengtsson/future 🚀 R package: future: Unified Parallel and Distributed Processing in R for Everyone 950 2024-07-29
51 sparklyr/sparklyr R interface for Apache Spark 946 2024-09-12
52 mlr-org/mlr3 mlr3: Machine Learning in R - next generation 929 2024-09-19
53 ropensci/targets Function-oriented Make-like declarative workflows for R 917 2024-09-09
54 ThinkR-open/golem A Framework for Building Robust Shiny Apps 904 2024-09-06
55 MichelNivard/gptstudio GPT RStudio addins that enable GPT assisted coding, writing & analysis 892 2024-09-13
56 rstudio/pagedown Paginate the HTML Output of R Markdown with CSS for Print 887 2024-09-03
57 r-lib/testthat An R 📦 to make testing 😀 887 2024-09-10
58 easystats/see 🎨 Visualisation toolbox for beautiful and publication-ready figures 880 2024-09-06
59 allisonhorst/palmerpenguins A great intro dataset for data exploration & visualization (alternative to iris). 875 2024-09-19
60 hadley/r-pkgs Building R packages 870 2024-09-20
61 rstudio/pointblank Data quality assessment and metadata reporting for data frames and database tables 862 2024-09-20
62 klmr/box Write reusable, composable and modular R code 860 2024-08-11
63 r-tmap/tmap R package for thematic maps 856 2024-09-13
64 r-lib/usethis Set up commonly used 📦 components 854 2024-09-10
65 business-science/tidyquant Bringing financial analysis to the tidyverse 853 2024-09-02
66 dselivanov/text2vec Fast vectorization, topic modeling, distances and GloVe word embeddings in R. 850 2024-08-16
67 daattali/addinslist 📜 Discover and install useful RStudio addins 842 2024-08-18
68 quanteda/quanteda An R package for the Quantitative Analysis of Textual Data 840 2024-09-02
69 mjskay/ggdist Visualizations of distributions and uncertainty 838 2024-07-27
70 YuLab-SMU/ggtree 🎄Visualization and annotation of phylogenetic trees 834 2024-08-20
71 rstudio/keras3 R Interface to Keras 831 2024-09-06
72 dreamRs/shinyWidgets shinyWidgets : Extend widgets available in shiny 825 2024-09-16
73 joshuaulrich/quantmod Quantitative Financial Modelling Framework 810 2024-08-15
74 ipeaGIT/geobr Easy access to official spatial data sets of Brazil in R and Python 790 2024-09-16
75 ramnathv/htmlwidgets HTML Widgets for R 790 2024-05-04
76 ropensci/rtweet 🐦 R client for interacting with Twitter's [stream and REST] APIs 785 2024-04-15
77 davidgohel/ggiraph make 'ggplot' graphics interactive 774 2024-05-17
78 tidymodels/tidymodels Easily install and load the tidymodels packages 766 2024-08-15
79 hms-dbmi/UpSetR An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al.. 753 2024-08-04
80 GuangchuangYu/hexSticker ✨ Hexagon sticker in R 751 2024-08-29
81 tidyverse/reprex Render bits of R code for sharing, e.g., on GitHub or StackOverflow. 739 2024-09-10
82 daattali/shinyjs 💡 Easily improve the user experience of your Shiny apps in seconds 734 2024-08-18
83 tidyverse/lubridate Make working with dates in R just that little bit easier 728 2024-08-05
84 erikaduan/r_tips A repository of R usage tips for data cleaning, data mining, data visualisation, statistical inference and machine learning 724 2024-08-29
85 tidymodels/infer An R package for tidyverse-friendly statistical inference 723 2024-09-18
86 opencpu/opencpu OpenCPU system for embedded scientific computation and reproducible research 721 2024-09-09
87 mjskay/tidybayes Bayesian analysis + tidy data + geoms (R package) 718 2024-09-17
88 tidyverse/glue Glue strings to data in R. Small, fast, dependency free interpreted string literals. 717 2024-09-19
89 r-lib/styler Non-invasive pretty printing of R code 716 2024-09-20
90 r-lib/pkgdown Generate static html documentation for an R package 713 2024-09-18
91 rweekly/rweekly.org R Weekly 703 2024-09-02
92 wilkelab/cowplot cowplot: Streamlined Plot Theme and Plot Annotations for ggplot2 702 2024-06-28
93 easystats/report 📜 🎉 Automated reporting of objects in R 694 2024-09-13
94 haozhu233/kableExtra Construct Complex Table with knitr::kable() + pipe. 688 2024-07-10
95 gkaramanis/tidytuesday Code and plots for submissions to the #tidytuesday challenge 685 2024-09-20
96 r-spatial/rgee Google Earth Engine for R 671 2024-09-20
97 benmarwick/rrtools rrtools: Tools for Writing Reproducible Research in R 671 2024-06-06
98 tidyverse/dtplyr Data table backend for dplyr 664 2024-09-05
99 tidyverse/tibble A modern re-imagining of the data frame 664 2024-09-16
100 nanxstats/ggsci 🦄 Scientific journal and sci-fi themed color palettes for ggplot2 661 2024-07-20
101 hrbrmstr/ggalt 🌎 Extra Coordinate Systems, Geoms, Statistical Transformations & Scales for 'ggplot2' 659 2024-04-03
102 giocomai/ganttrify Create beautiful Gantt charts with ggplot2 654 2024-07-16
103 daattali/timevis 📅 Create interactive timeline visualizations in R 654 2024-08-18
104 r-lib/cli Tools for making beautiful & useful command line interfaces 644 2024-09-19
105 TheEconomist/covid-19-excess-deaths-tracker Source code and data for The Economist's covid-19 excess deaths tracker 641 2024-09-20
106 walkerke/tidycensus Load US Census boundary and attribute data as 'tidyverse' and 'sf'-ready data frames in R 640 2024-09-20
107 tidyverse/multidplyr A dplyr backend that partitions a data frame over multiple processes 640 2024-07-29
108 leedrake5/Russia-Ukraine Equipment Loss Tracking 627 2024-09-19
109 AllanCameron/geomtextpath Create curved text paths in ggplot2 624 2024-06-14
110 KentonWhite/ProjectTemplate A template utility for R projects that provides a skeletal project. 622 2024-07-01
111 datalorax/equatiomatic Convert models to LaTeX equations 616 2024-08-24
112 erikgahner/PolData A dataset with political datasets 616 2024-09-07
113 business-science/timetk Time series analysis in the tidyverse 612 2024-06-11
114 ajdamico/asdfree analyze survey data for free 609 2024-09-13
115 strengejacke/sjPlot sjPlot - Data Visualization for Statistics in Social Science 606 2024-08-28
116 tidyverse/stringr A fresh approach to string manipulation in R 601 2024-08-20
117 gesistsa/rio 🐟 A Swiss-Army Knife for Data I/O 598 2024-09-11
118 JohannesNE/literature-clock Clock using time quotes from the literature, based on the work of Jaap Meijers 596 2024-06-15
119 DiskFrame/disk.frame Fast Disk-Based Parallelized Data Manipulation Framework for Larger-than-RAM Data 594 2024-09-10
120 nstrayer/datadrivencv R package for building customizable CVs from spreadsheets 592 2024-06-18
121 davidgohel/officer 👮 officer: office documents from R 592 2024-09-17
122 r-lib/roxygen2 Generate R package documentation from inline R comments 591 2024-08-02
123 r-lidar/lidR Airborne LiDAR data manipulation and visualisation for forestry application 588 2024-09-17
124 tidymodels/parsnip A tidy unified interface to models 586 2024-09-19
125 elbersb/tidylog Tidylog provides feedback about dplyr and tidyr operations. It provides wrapper functions for the most common functions, such as filter, mutate, select, and group_by, and provides detailed output for ... 585 2024-06-11
126 ggobi/ggally R package that extends ggplot2 584 2024-05-15
127 thackl/gggenomes A grammar of graphics for comparative genomics 581 2024-08-30
128 REditorSupport/languageserver An implementation of the Language Server Protocol for R 581 2024-04-29
129 joey711/phyloseq phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See ... 579 2024-04-29
130 const-ae/ggsignif Easily add significance brackets to your ggplots 575 2024-08-11
131 tidymodels/recipes Pipeable steps for feature engineering and data preprocessing to prepare for modeling 564 2024-09-18
132 easystats/bayestestR 👻 Utilities for analyzing Bayesian models and posterior distributions 561 2024-09-17
133 tidyverts/fable Tidy time series forecasting 559 2024-09-17
134 broadinstitute/infercnv Inferring CNV from Single-Cell RNA-Seq 556 2024-08-08
135 r-spatial/stars Spatiotemporal Arrays, Raster and Vector Data Cubes 555 2024-09-02
136 teunbrand/ggh4x ggplot extension: options for tailored facets, multiple colourscales and miscellaneous 554 2024-09-07
137 davidgohel/flextable table farming 554 2024-09-02
138 tidyverse/forcats 🐈🐈🐈🐈: tools for working with categorical variables (factors) 553 2024-08-09
139 rstudio/blastula Easily send great-looking HTML email messages from R 546 2024-07-10
140 thomasp85/tidygraph A tidy API for graph manipulation 546 2024-07-17
141 strengejacke/ggeffects Estimated Marginal Means and Marginal Effects from Regression Models for ggplot2 544 2024-09-11
142 igraph/rigraph igraph R package 543 2024-09-20
143 ropensci/tabulapdf Bindings for Tabula PDF Table Extractor Library 542 2024-09-19
144 eclarke/ggbeeswarm Column scatter / beeswarm-style plots in ggplot2 532 2024-06-25
145 tidyverts/tsibble Tidy Temporal Data Frames and Tools 528 2024-06-26
146 sinhrks/ggfortify Define fortify and autoplot functions to allow ggplot2 to handle some popular R packages. 527 2024-06-24
147 davidsjoberg/ggbump A geom for ggplot to create bump plots 526 2024-04-03
148 business-science/modeltime Modeltime unlocks time series forecast models and machine learning in one framework 523 2024-07-29
149 yutannihilation/gghighlight Highlight points and lines in ggplot2 520 2024-09-06
150 Pecners/rayshader_portraits - 519 2024-08-21
151 YinLiLin/CMplot 📊 Circular and Rectangular Manhattan Plot 514 2024-05-20
152 r-dbi/bigrquery An interface to Google's BigQuery from R. 512 2024-09-20
153 r-lib/rlang Low-level API for programming with R 501 2024-09-09
154 massimoaria/bibliometrix An R-tool for comprehensive science mapping analysis. A package for quantitative research in scientometrics and bibliometrics. 500 2024-07-02
155 Appsilon/shiny.semantic Shiny support for powerful Fomantic UI library. 498 2024-05-02
156 cynkra/dm Working with relational data models in R 497 2024-09-17
157 hbctraining/scRNA-seq_online - 496 2024-08-30
158 corybrunson/ggalluvial ggplot2 extension for alluvial plots 495 2024-08-10
159 kassambara/survminer Survival Analysis and Visualization 495 2024-04-08
160 hadley/plyr A R package for splitting, applying and combining large problems into simpler problems 493 2024-05-28
161 giuseppec/iml iml: interpretable machine learning R package 491 2024-09-20
162 tidyverse/dbplyr Database (DBI) backend for dplyr 473 2024-09-09
163 tonyfischetti/assertr Assertive programming for R analysis pipelines 472 2024-04-11
164 pola-rs/r-polars Polars R binding 467 2024-09-17
165 saeyslab/nichenetr NicheNet: predict active ligand-target links between interacting cells 467 2024-09-05
166 r-lib/progress Progress bar in your R terminal 467 2024-08-29
167 benjjneb/dada2 Accurate sample inference from amplicon data with single nucleotide resolution 464 2024-05-27
168 rstudio/hex-stickers RStudio hex stickers 462 2024-09-19
169 ropensci-review-tools/goodpractice Advice on R Package Building 461 2024-08-09
170 JaseZiv/worldfootballR A wrapper for extracting world football (soccer) data from FBref, Transfermark, Understat 460 2024-09-02
171 e-sensing/sits Satellite image time series in R 460 2024-09-16
172 TheEconomist/covid-19-the-economist-global-excess-deaths-model The Economist's model to estimate excess deaths to the covid-19 pandemic 459 2024-08-13
173 ropensci/magick Magic, madness, heaven, sin 456 2024-09-19
174 RinteRface/shinydashboardPlus extensions for shinydashboard 454 2024-08-01
175 ropensci/visdat Preliminary Exploratory Visualisation of Data 450 2024-07-18
176 markfairbanks/tidytable Tidy interface to 'data.table' 449 2024-07-29
177 vegandevs/vegan R package for community ecologists: popular ordination methods, ecological null models & diversity analysis 446 2024-09-19
178 gadenbuie/xaringanthemer 😎 Give your xaringan slides some style 445 2024-09-16
179 omnideconv/immunedeconv A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods 441 2024-08-05
180 PoisonAlien/maftools Summarize, Analyze and Visualize MAF files from TCGA or in-house studies. 440 2024-09-11
181 RinteRface/bs4Dash Bootstrap 4 shinydashboard using AdminLTE3 437 2024-09-06
182 amices/mice Multivariate Imputation by Chained Equations 437 2024-09-18
183 vincentarelbundock/marginaleffects R package to compute and plot predictions, slopes, marginal means, and comparisons (contrasts, risk ratios, odds, etc.) for over 100 classes of statistical and ML models. Conduct linear and non-linear ... 435 2024-09-14
184 r-causal/ggdag ↙️ ↘️ An R package for working with causal directed acyclic graphs (DAGs) 433 2024-07-22
185 nmaggiulli/of-dollars-and-data Repo for ofdollarsanddata.com blog 432 2024-09-19
186 easystats/correlation 🔗 Methods for Correlation Analysis 431 2024-09-12
187 stan-dev/bayesplot bayesplot R package for plotting Bayesian models 431 2024-08-05
188 yrosseel/lavaan an R package for structural equation modeling and more 427 2024-09-12
189 easystats/parameters 📊 Computation and processing of models' parameters 425 2024-09-17
190 MRCIEU/TwoSampleMR R package for performing 2-sample MR using MR-Base database 418 2024-09-06
191 ropensci/stplanr Sustainable transport planning with R 418 2024-08-22
192 nflverse/nflfastR A Set of Functions to Efficiently Scrape NFL Play by Play Data 415 2024-09-17
193 wilkelab/ggridges Ridgeline plots in ggplot2 412 2024-05-15
194 r-lib/here A simpler way to find your files 411 2024-09-15
195 LKremer/ggpointdensity 📈 📊 Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot. 407 2024-05-16
196 r-lib/R6 Encapsulated object-oriented programming for R 407 2024-09-06
197 data-cleaning/validate Professional data validation for the R environment 403 2024-06-14
198 RinteRface/shinyMobile shiny API for Framework7 (IOS/android) 402 2024-07-17
199 chris-mcginnis-ucsf/DoubletFinder R package for detecting doublets in single-cell RNA sequencing data 400 2024-05-14
200 kevinblighe/EnhancedVolcano Publication-ready volcano plots with enhanced colouring and labeling 400 2024-06-12

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