Mm_P_NGS_ImmuneCellTyping_v1.0.pkc

{
  "Name": "Mouse NGS Immune Cell Typing Protein", 
  "Version": 1.0, 
  "AnalyteType": "Protein", 
  "MinArea": 1600, 
  "MinNuclei": 20, 
  "Compatibility": "01", 
  "Date": "210802", 
  "ReporterSpace": "0", 
  "ProbeGroups": [
    {
      "Name": "Cytotoxicity", 
      "Targets": [
        "GZMB"
      ]
    }, 
    {
      "Name": "Th cells", 
      "Targets": [
        "CD4", 
        "FOXP3"
      ]
    }, 
    {
      "Name": "B cells", 
      "Targets": [
        "CD19"
      ]
    }, 
    {
      "Name": "DC", 
      "Targets": [
        "BatF3"
      ]
    }, 
    {
      "Name": "Checkpoint", 
      "Targets": [
        "CD28"
      ]
    }, 
    {
      "Name": "Antigen Presentation", 
      "Targets": [
        "BatF3"
      ]
    }, 
    {
      "Name": "Tregs", 
      "Targets": [
        "FOXP3"
      ]
    }, 
    {
      "Name": "T cells", 
      "Targets": [
        "CD4", 
        "FOXP3", 
        "CD28", 
        "CD3e", 
        "CD8a"
      ]
    }, 
    {
      "Name": "Fibroblasts", 
      "Targets": [
        "Fibronectin"
      ]
    }, 
    {
      "Name": "Myeloid", 
      "Targets": [
        "CD4"
      ]
    }, 
    {
      "Name": "Hematopoietic", 
      "Targets": [
        "CD34"
      ]
    }, 
    {
      "Name": "CD8 T cells", 
      "Targets": [
        "CD8a"
      ]
    }, 
    {
      "Name": "Stroma", 
      "Targets": [
        "Fibronectin"
      ]
    }, 
    {
      "Name": "T cell Activation", 
      "Targets": [
        "GZMB", 
        "CD28"
      ]
    }
  ], 
  "ProbeGroupVersion": 1.0, 
  "Targets": [
    {
      "GeneID": [
        20371
      ], 
      "AnalyteType": "Protein", 
      "DisplayName": "FOXP3", 
      "SystematicName": [
        "Foxp3"
      ], 
      "CodeClass": "Endogenous", 
      "RTS_ID": "RTS0048414", 
      "RTS_Seq": "ACCTCGGAGTAC", 
      "Probes": [
        {
          "ProbeID": "DPROT_00090.1", 
          "Accession": [
            "Q53Z59", 
            "Q99JB6"
          ]
        }
      ]
    }, 
    {
      "GeneID": [
        12487
      ], 
      "AnalyteType": "Protein", 
      "DisplayName": "CD28", 
      "SystematicName": [
        "Cd28"
      ], 
      "CodeClass": "Endogenous", 
      "RTS_ID": "RTS0048413", 
      "RTS_Seq": "ACACATCCTACG", 
      "Probes": [
        {
          "ProbeID": "DPROT_00260.1", 
          "Accession": [
            "Q8CDB3", 
            "P31041"
          ]
        }
      ]
    }, 
    {
      "GeneID": [
        14939
      ], 
      "AnalyteType": "Protein", 
      "DisplayName": "GZMB", 
      "SystematicName": [
        "Gzmb"
      ], 
      "CodeClass": "Endogenous", 
      "RTS_ID": "RTS0048403", 
      "RTS_Seq": "CCACCTCACCTA", 
      "Probes": [
        {
          "ProbeID": "DPROT_00079.1", 
          "Accession": [
            "Q3TZH4", 
            "P04187"
          ]
        }
      ]
    }, 
    {
      "GeneID": [
        12490
      ], 
      "AnalyteType": "Protein", 
      "DisplayName": "CD34", 
      "SystematicName": [
        "Cd34"
      ], 
      "CodeClass": "Endogenous", 
      "RTS_ID": "RTS0020830", 
      "RTS_Seq": "GAATGGTGTATC", 
      "Probes": [
        {
          "ProbeID": "DPROT_00048.1", 
          "Accession": [
            "Q543Y2", 
            "Q543B6", 
            "Q64314"
          ]
        }
      ]
    }, 
    {
      "GeneID": [
        12504
      ], 
      "AnalyteType": "Protein", 
      "DisplayName": "CD4", 
      "SystematicName": [
        "Cd4"
      ], 
      "CodeClass": "Endogenous", 
      "RTS_ID": "RTS0048408", 
      "RTS_Seq": "TAAGTGCAGCTT", 
      "Probes": [
        {
          "ProbeID": "DPROT_00075.1", 
          "Accession": [
            "Q3TSV7", 
            "P06332"
          ]
        }
      ]
    }, 
    {
      "GeneID": [
        14268
      ], 
      "AnalyteType": "Protein", 
      "DisplayName": "Fibronectin", 
      "SystematicName": [
        "Fn1"
      ], 
      "CodeClass": "Endogenous", 
      "RTS_ID": "RTS0048407", 
      "RTS_Seq": "TCCTATATGCAG", 
      "Probes": [
        {
          "ProbeID": "DPROT_00081.1", 
          "Accession": [
            "Q3UGY5", 
            "A0A087WR50", 
            "A0A087WS56", 
            "Q3UZF9", 
            "P11276", 
            "B7ZNJ1", 
            "Q3UHL6", 
            "B9EHT6", 
            "Q3UH17", 
            "A0A087WSN6", 
            "Q3UHR1", 
            "Q3TBB4"
          ]
        }
      ]
    }, 
    {
      "GeneID": [
        12525
      ], 
      "AnalyteType": "Protein", 
      "DisplayName": "CD8a", 
      "SystematicName": [
        "Cd8a"
      ], 
      "CodeClass": "Endogenous", 
      "RTS_ID": "RTS0048409", 
      "RTS_Seq": "TCTTGATCTTAT", 
      "Probes": [
        {
          "ProbeID": "DPROT_00078.1", 
          "Accession": [
            "P01731", 
            "Q8CAX3"
          ]
        }
      ]
    }, 
    {
      "GeneID": [
        381319
      ], 
      "AnalyteType": "Protein", 
      "DisplayName": "BatF3", 
      "SystematicName": [
        "Batf3"
      ], 
      "CodeClass": "Endogenous", 
      "RTS_ID": "RTS0048402", 
      "RTS_Seq": "TGCCGCTCTTGA", 
      "Probes": [
        {
          "ProbeID": "DPROT_00351.1", 
          "Accession": [
            "Q9D275"
          ]
        }
      ]
    }, 
    {
      "GeneID": [
        12501
      ], 
      "AnalyteType": "Protein", 
      "DisplayName": "CD3e", 
      "SystematicName": [
        "Cd3e"
      ], 
      "CodeClass": "Endogenous", 
      "RTS_ID": "RTS0048406", 
      "RTS_Seq": "GGCGTTATTGAT", 
      "Probes": [
        {
          "ProbeID": "DPROT_00074.1", 
          "Accession": [
            "A6H6M1", 
            "P22646"
          ]
        }
      ]
    }, 
    {
      "GeneID": [
        12478
      ], 
      "AnalyteType": "Protein", 
      "DisplayName": "CD19", 
      "SystematicName": [
        "Cd19"
      ], 
      "CodeClass": "Endogenous", 
      "RTS_ID": "RTS0048404", 
      "RTS_Seq": "CTCGCCACCGAG", 
      "Probes": [
        {
          "ProbeID": "DPROT_00073.1", 
          "Accession": [
            "Q3TQG5", 
            "P25918"
          ]
        }
      ]
    }
  ]
}